Gene : Thecc1EG014780 T. cacao v1.1

Defline:  (1 of 1) PTHR24089//PTHR24089:SF294 - FAMILY NOT NAMED // CALCIUM-BINDING TRANSPORTER-LIKE PROTEIN Genomic Order:  1442
Name:  ? Thecc1EG014780 Secondary Identifier:  ? PAC:27447572

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG014780 0.5kb upstream 0.5kb upstream 5276 true scaffold_3: 24438376-24443651 Theobroma cacao
Thecc1EG014780 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 24438376-24438875 Theobroma cacao
Thecc1EG014780 0.5kb downstream 0.5kb downstream 5276 true scaffold_3: 24438876-24444151 Theobroma cacao
Thecc1EG014780 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 24443652-24444151 Theobroma cacao
Thecc1EG014780 1.0kb upstream 1.0kb upstream 5776 true scaffold_3: 24437876-24443651 Theobroma cacao
Thecc1EG014780 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 24437876-24438875 Theobroma cacao
Thecc1EG014780 1.0kb downstream 1.0kb downstream 5776 true scaffold_3: 24438876-24444651 Theobroma cacao
Thecc1EG014780 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 24443652-24444651 Theobroma cacao
Thecc1EG014780 2.0kb upstream 2.0kb upstream 6776 true scaffold_3: 24436876-24443651 Theobroma cacao
Thecc1EG014780 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 24436876-24438875 Theobroma cacao
Thecc1EG014780 2.0kb downstream 2.0kb downstream 6776 true scaffold_3: 24438876-24445651 Theobroma cacao
Thecc1EG014780 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 24443652-24445651 Theobroma cacao
Thecc1EG014780 5.0kb upstream 5.0kb upstream 9776 true scaffold_3: 24433876-24443651 Theobroma cacao
Thecc1EG014780 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 24433876-24438875 Theobroma cacao
Thecc1EG014780 5.0kb downstream 5.0kb downstream 9776 true scaffold_3: 24438876-24448651 Theobroma cacao
Thecc1EG014780 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 24443652-24448651 Theobroma cacao
Thecc1EG014780 10.0kb upstream 10.0kb upstream 14776 true scaffold_3: 24428876-24443651 Theobroma cacao
Thecc1EG014780 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 24428876-24438875 Theobroma cacao
Thecc1EG014780 10.0kb downstream 10.0kb downstream 14776 true scaffold_3: 24438876-24453651 Theobroma cacao
Thecc1EG014780 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 24443652-24453651 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123837678 5264 Brassicales-Malvales View MSA
124336805 5266 SBM View MSA
124240312 5268 Malvidae View MSA
124072289 5270 Rosid View MSA
123740149 5271 Pentapetalae View MSA
122790227 5272 Eudicot View MSA
122042034 5273 Angiosperm View MSA
123429077 5275 Viridiplantae View MSA
121349229 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain