Gene : Thecc1EG014772 T. cacao v1.1
Defline:  (1 of 1) PTHR11062:SF81 - BETA-1,4-XYLOSYLTRANSFERASE IRX10L-RELATED Genomic Order:  1435
Name:  ? Thecc1EG014772 Secondary Identifier:  ? PAC:27447706
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-5980 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG014772 0.5kb upstream 0.5kb upstream 4579 true scaffold_3: 24413177-24417755 Theobroma cacao
Thecc1EG014772 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 24413177-24413676 Theobroma cacao
Thecc1EG014772 0.5kb downstream 0.5kb downstream 4579 true scaffold_3: 24413677-24418255 Theobroma cacao
Thecc1EG014772 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 24417756-24418255 Theobroma cacao
Thecc1EG014772 1.0kb upstream 1.0kb upstream 5079 true scaffold_3: 24412677-24417755 Theobroma cacao
Thecc1EG014772 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 24412677-24413676 Theobroma cacao
Thecc1EG014772 1.0kb downstream 1.0kb downstream 5079 true scaffold_3: 24413677-24418755 Theobroma cacao
Thecc1EG014772 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 24417756-24418755 Theobroma cacao
Thecc1EG014772 2.0kb upstream 2.0kb upstream 6079 true scaffold_3: 24411677-24417755 Theobroma cacao
Thecc1EG014772 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 24411677-24413676 Theobroma cacao
Thecc1EG014772 2.0kb downstream 2.0kb downstream 6079 true scaffold_3: 24413677-24419755 Theobroma cacao
Thecc1EG014772 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 24417756-24419755 Theobroma cacao
Thecc1EG014772 5.0kb upstream 5.0kb upstream 9079 true scaffold_3: 24408677-24417755 Theobroma cacao
Thecc1EG014772 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 24408677-24413676 Theobroma cacao
Thecc1EG014772 5.0kb downstream 5.0kb downstream 9079 true scaffold_3: 24413677-24422755 Theobroma cacao
Thecc1EG014772 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 24417756-24422755 Theobroma cacao
Thecc1EG014772 10.0kb upstream 10.0kb upstream 14079 true scaffold_3: 24403677-24417755 Theobroma cacao
Thecc1EG014772 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 24403677-24413676 Theobroma cacao
Thecc1EG014772 10.0kb downstream 10.0kb downstream 14079 true scaffold_3: 24413677-24427755 Theobroma cacao
Thecc1EG014772 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 24417756-24427755 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123831717 5264 Brassicales-Malvales View MSA
124343729 5266 SBM View MSA
124242312 5268 Malvidae View MSA
124072304 5270 Rosid View MSA
123741163 5271 Pentapetalae View MSA
122792713 5272 Eudicot View MSA
122045479 5273 Angiosperm View MSA
121345748 5274 Embryophyte View MSA
123428712 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain