Gene : Thecc1EG014761 T. cacao v1.1

Defline:  (1 of 3) PTHR10857//PTHR10857:SF26 - COPINE // PROTEIN BONZAI 3 Genomic Order:  1425
Name:  ? Thecc1EG014761 Secondary Identifier:  ? PAC:27450418

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG014761 0.5kb upstream 0.5kb upstream 7992 true scaffold_3: 24347545-24355536 Theobroma cacao
Thecc1EG014761 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 24347545-24348044 Theobroma cacao
Thecc1EG014761 0.5kb downstream 0.5kb downstream 7992 true scaffold_3: 24348045-24356036 Theobroma cacao
Thecc1EG014761 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 24355537-24356036 Theobroma cacao
Thecc1EG014761 1.0kb upstream 1.0kb upstream 8492 true scaffold_3: 24347045-24355536 Theobroma cacao
Thecc1EG014761 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 24347045-24348044 Theobroma cacao
Thecc1EG014761 1.0kb downstream 1.0kb downstream 8492 true scaffold_3: 24348045-24356536 Theobroma cacao
Thecc1EG014761 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 24355537-24356536 Theobroma cacao
Thecc1EG014761 2.0kb upstream 2.0kb upstream 9492 true scaffold_3: 24346045-24355536 Theobroma cacao
Thecc1EG014761 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 24346045-24348044 Theobroma cacao
Thecc1EG014761 2.0kb downstream 2.0kb downstream 9492 true scaffold_3: 24348045-24357536 Theobroma cacao
Thecc1EG014761 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 24355537-24357536 Theobroma cacao
Thecc1EG014761 5.0kb upstream 5.0kb upstream 12492 true scaffold_3: 24343045-24355536 Theobroma cacao
Thecc1EG014761 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 24343045-24348044 Theobroma cacao
Thecc1EG014761 5.0kb downstream 5.0kb downstream 12492 true scaffold_3: 24348045-24360536 Theobroma cacao
Thecc1EG014761 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 24355537-24360536 Theobroma cacao
Thecc1EG014761 10.0kb upstream 10.0kb upstream 17492 true scaffold_3: 24338045-24355536 Theobroma cacao
Thecc1EG014761 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 24338045-24348044 Theobroma cacao
Thecc1EG014761 10.0kb downstream 10.0kb downstream 17492 true scaffold_3: 24348045-24365536 Theobroma cacao
Thecc1EG014761 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 24355537-24365536 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123837759 5264 Brassicales-Malvales View MSA
124322350 5266 SBM View MSA
124249800 5268 Malvidae View MSA
124064124 5270 Rosid View MSA
123745064 5271 Pentapetalae View MSA
122788484 5272 Eudicot View MSA
122043843 5273 Angiosperm View MSA
121351001 5274 Embryophyte View MSA
123424570 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain