Gene : Thecc1EG014705 T. cacao v1.1
Defline:  (1 of 3) 5.4.99.28 - tRNA pseudouridine(32) synthase / Pseudouridine synthase RluA Genomic Order:  1380
Name:  ? Thecc1EG014705 Secondary Identifier:  ? PAC:27446802
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG014705 0.5kb upstream 0.5kb upstream 8884 true scaffold_3: 23956482-23965365 Theobroma cacao
Thecc1EG014705 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 23956482-23956981 Theobroma cacao
Thecc1EG014705 0.5kb downstream 0.5kb downstream 8884 true scaffold_3: 23956982-23965865 Theobroma cacao
Thecc1EG014705 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 23965366-23965865 Theobroma cacao
Thecc1EG014705 1.0kb upstream 1.0kb upstream 9384 true scaffold_3: 23955982-23965365 Theobroma cacao
Thecc1EG014705 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 23955982-23956981 Theobroma cacao
Thecc1EG014705 1.0kb downstream 1.0kb downstream 9384 true scaffold_3: 23956982-23966365 Theobroma cacao
Thecc1EG014705 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 23965366-23966365 Theobroma cacao
Thecc1EG014705 2.0kb upstream 2.0kb upstream 10384 true scaffold_3: 23954982-23965365 Theobroma cacao
Thecc1EG014705 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 23954982-23956981 Theobroma cacao
Thecc1EG014705 2.0kb downstream 2.0kb downstream 10384 true scaffold_3: 23956982-23967365 Theobroma cacao
Thecc1EG014705 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 23965366-23967365 Theobroma cacao
Thecc1EG014705 5.0kb upstream 5.0kb upstream 13384 true scaffold_3: 23951982-23965365 Theobroma cacao
Thecc1EG014705 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 23951982-23956981 Theobroma cacao
Thecc1EG014705 5.0kb downstream 5.0kb downstream 13384 true scaffold_3: 23956982-23970365 Theobroma cacao
Thecc1EG014705 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 23965366-23970365 Theobroma cacao
Thecc1EG014705 10.0kb upstream 10.0kb upstream 18384 true scaffold_3: 23946982-23965365 Theobroma cacao
Thecc1EG014705 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 23946982-23956981 Theobroma cacao
Thecc1EG014705 10.0kb downstream 10.0kb downstream 18384 true scaffold_3: 23956982-23975365 Theobroma cacao
Thecc1EG014705 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 23965366-23975365 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123832129 5264 Brassicales-Malvales View MSA
124340361 5266 SBM View MSA
124237207 5268 Malvidae View MSA
124064384 5270 Rosid View MSA
123747081 5271 Pentapetalae View MSA
122790288 5272 Eudicot View MSA
122047695 5273 Angiosperm View MSA
121349064 5274 Embryophyte View MSA
123426945 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain