Gene : Thecc1EG014915 T. cacao v1.1

Defline:  (1 of 1) K06674 - structural maintenance of chromosome 2 (SMC2) Genomic Order:  1566
Name:  ? Thecc1EG014915 Secondary Identifier:  ? PAC:27447230

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG014915 0.5kb upstream 0.5kb upstream 11698 true scaffold_3: 25127981-25139678 Theobroma cacao
Thecc1EG014915 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 25139179-25139678 Theobroma cacao
Thecc1EG014915 0.5kb downstream 0.5kb downstream 11698 true scaffold_3: 25127481-25139178 Theobroma cacao
Thecc1EG014915 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 25127481-25127980 Theobroma cacao
Thecc1EG014915 1.0kb upstream 1.0kb upstream 12198 true scaffold_3: 25127981-25140178 Theobroma cacao
Thecc1EG014915 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 25139179-25140178 Theobroma cacao
Thecc1EG014915 1.0kb downstream 1.0kb downstream 12198 true scaffold_3: 25126981-25139178 Theobroma cacao
Thecc1EG014915 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 25126981-25127980 Theobroma cacao
Thecc1EG014915 2.0kb upstream 2.0kb upstream 13198 true scaffold_3: 25127981-25141178 Theobroma cacao
Thecc1EG014915 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 25139179-25141178 Theobroma cacao
Thecc1EG014915 2.0kb downstream 2.0kb downstream 13198 true scaffold_3: 25125981-25139178 Theobroma cacao
Thecc1EG014915 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 25125981-25127980 Theobroma cacao
Thecc1EG014915 5.0kb upstream 5.0kb upstream 16198 true scaffold_3: 25127981-25144178 Theobroma cacao
Thecc1EG014915 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 25139179-25144178 Theobroma cacao
Thecc1EG014915 5.0kb downstream 5.0kb downstream 16198 true scaffold_3: 25122981-25139178 Theobroma cacao
Thecc1EG014915 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 25122981-25127980 Theobroma cacao
Thecc1EG014915 10.0kb upstream 10.0kb upstream 21198 true scaffold_3: 25127981-25149178 Theobroma cacao
Thecc1EG014915 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 25139179-25149178 Theobroma cacao
Thecc1EG014915 10.0kb downstream 10.0kb downstream 21198 true scaffold_3: 25117981-25139178 Theobroma cacao
Thecc1EG014915 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 25117981-25127980 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123836055 5264 Brassicales-Malvales View MSA
124345038 5266 SBM View MSA
124237129 5268 Malvidae View MSA
124060977 5270 Rosid View MSA
123743614 5271 Pentapetalae View MSA
122788228 5272 Eudicot View MSA
122047699 5273 Angiosperm View MSA
121347221 5274 Embryophyte View MSA
123426033 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain