Gene : Thecc1EG014902 T. cacao v1.1

Defline:  (1 of 1) PTHR31807//PTHR31807:SF10 - FAMILY NOT NAMED // QWRF MOTIF-CONTAINING PROTEIN 7 Genomic Order:  1555
Name:  ? Thecc1EG014902 Secondary Identifier:  ? PAC:27447888

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG014902 0.5kb upstream 0.5kb upstream 2762 true scaffold_3: 25027262-25030023 Theobroma cacao
Thecc1EG014902 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 25029524-25030023 Theobroma cacao
Thecc1EG014902 0.5kb downstream 0.5kb downstream 2762 true scaffold_3: 25026762-25029523 Theobroma cacao
Thecc1EG014902 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 25026762-25027261 Theobroma cacao
Thecc1EG014902 1.0kb upstream 1.0kb upstream 3262 true scaffold_3: 25027262-25030523 Theobroma cacao
Thecc1EG014902 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 25029524-25030523 Theobroma cacao
Thecc1EG014902 1.0kb downstream 1.0kb downstream 3262 true scaffold_3: 25026262-25029523 Theobroma cacao
Thecc1EG014902 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 25026262-25027261 Theobroma cacao
Thecc1EG014902 2.0kb upstream 2.0kb upstream 4262 true scaffold_3: 25027262-25031523 Theobroma cacao
Thecc1EG014902 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 25029524-25031523 Theobroma cacao
Thecc1EG014902 2.0kb downstream 2.0kb downstream 4262 true scaffold_3: 25025262-25029523 Theobroma cacao
Thecc1EG014902 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 25025262-25027261 Theobroma cacao
Thecc1EG014902 5.0kb upstream 5.0kb upstream 7262 true scaffold_3: 25027262-25034523 Theobroma cacao
Thecc1EG014902 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 25029524-25034523 Theobroma cacao
Thecc1EG014902 5.0kb downstream 5.0kb downstream 7262 true scaffold_3: 25022262-25029523 Theobroma cacao
Thecc1EG014902 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 25022262-25027261 Theobroma cacao
Thecc1EG014902 10.0kb upstream 10.0kb upstream 12262 true scaffold_3: 25027262-25039523 Theobroma cacao
Thecc1EG014902 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 25029524-25039523 Theobroma cacao
Thecc1EG014902 10.0kb downstream 10.0kb downstream 12262 true scaffold_3: 25017262-25029523 Theobroma cacao
Thecc1EG014902 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 25017262-25027261 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123827580 5264 Brassicales-Malvales View MSA
124350046 5266 SBM View MSA
124237661 5268 Malvidae View MSA
124050456 5270 Rosid View MSA
123752575 5271 Pentapetalae View MSA
122788375 5272 Eudicot View MSA
122044458 5273 Angiosperm View MSA
121348675 5274 Embryophyte View MSA
123426167 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain