Gene : Thecc1EG014847 T. cacao v1.1
Defline:  (1 of 119) PF00847 - AP2 domain (AP2) Genomic Order:  1507
Name:  ? Thecc1EG014847 Secondary Identifier:  ? PAC:27448202
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG014847 0.5kb upstream 0.5kb upstream 4981 true scaffold_3: 24766376-24771356 Theobroma cacao
Thecc1EG014847 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 24766376-24766875 Theobroma cacao
Thecc1EG014847 0.5kb downstream 0.5kb downstream 4981 true scaffold_3: 24766876-24771856 Theobroma cacao
Thecc1EG014847 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 24771357-24771856 Theobroma cacao
Thecc1EG014847 1.0kb upstream 1.0kb upstream 5481 true scaffold_3: 24765876-24771356 Theobroma cacao
Thecc1EG014847 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 24765876-24766875 Theobroma cacao
Thecc1EG014847 1.0kb downstream 1.0kb downstream 5481 true scaffold_3: 24766876-24772356 Theobroma cacao
Thecc1EG014847 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 24771357-24772356 Theobroma cacao
Thecc1EG014847 2.0kb upstream 2.0kb upstream 6481 true scaffold_3: 24764876-24771356 Theobroma cacao
Thecc1EG014847 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 24764876-24766875 Theobroma cacao
Thecc1EG014847 2.0kb downstream 2.0kb downstream 6481 true scaffold_3: 24766876-24773356 Theobroma cacao
Thecc1EG014847 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 24771357-24773356 Theobroma cacao
Thecc1EG014847 5.0kb upstream 5.0kb upstream 9481 true scaffold_3: 24761876-24771356 Theobroma cacao
Thecc1EG014847 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 24761876-24766875 Theobroma cacao
Thecc1EG014847 5.0kb downstream 5.0kb downstream 9481 true scaffold_3: 24766876-24776356 Theobroma cacao
Thecc1EG014847 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 24771357-24776356 Theobroma cacao
Thecc1EG014847 10.0kb upstream 10.0kb upstream 14481 true scaffold_3: 24756876-24771356 Theobroma cacao
Thecc1EG014847 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 24756876-24766875 Theobroma cacao
Thecc1EG014847 10.0kb downstream 10.0kb downstream 14481 true scaffold_3: 24766876-24781356 Theobroma cacao
Thecc1EG014847 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 24771357-24781356 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123818196 5264 Brassicales-Malvales Singleton cluster - no MSA
124314518 5266 SBM Singleton cluster - no MSA
124248805 5268 Malvidae View MSA
124063509 5270 Rosid View MSA
123746238 5271 Pentapetalae View MSA
122796887 5272 Eudicot View MSA
122050930 5273 Angiosperm View MSA
123428898 5275 Viridiplantae View MSA
121351000 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain