Gene : Thecc1EG014948 T. cacao v1.1
Defline:  (1 of 68) 3.1.1.11 - Pectinesterase / Pectin methylesterase Genomic Order:  1597
Name:  ? Thecc1EG014948 Secondary Identifier:  ? PAC:27448645
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-1081 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG014948 0.5kb upstream 0.5kb upstream 1149 true scaffold_3: 25312236-25313384 Theobroma cacao
Thecc1EG014948 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 25312236-25312735 Theobroma cacao
Thecc1EG014948 0.5kb downstream 0.5kb downstream 1149 true scaffold_3: 25312736-25313884 Theobroma cacao
Thecc1EG014948 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 25313385-25313884 Theobroma cacao
Thecc1EG014948 1.0kb upstream 1.0kb upstream 1649 true scaffold_3: 25311736-25313384 Theobroma cacao
Thecc1EG014948 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 25311736-25312735 Theobroma cacao
Thecc1EG014948 1.0kb downstream 1.0kb downstream 1649 true scaffold_3: 25312736-25314384 Theobroma cacao
Thecc1EG014948 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 25313385-25314384 Theobroma cacao
Thecc1EG014948 2.0kb upstream 2.0kb upstream 2649 true scaffold_3: 25310736-25313384 Theobroma cacao
Thecc1EG014948 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 25310736-25312735 Theobroma cacao
Thecc1EG014948 2.0kb downstream 2.0kb downstream 2649 true scaffold_3: 25312736-25315384 Theobroma cacao
Thecc1EG014948 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 25313385-25315384 Theobroma cacao
Thecc1EG014948 5.0kb upstream 5.0kb upstream 5649 true scaffold_3: 25307736-25313384 Theobroma cacao
Thecc1EG014948 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 25307736-25312735 Theobroma cacao
Thecc1EG014948 5.0kb downstream 5.0kb downstream 5649 true scaffold_3: 25312736-25318384 Theobroma cacao
Thecc1EG014948 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 25313385-25318384 Theobroma cacao
Thecc1EG014948 10.0kb upstream 10.0kb upstream 10649 true scaffold_3: 25302736-25313384 Theobroma cacao
Thecc1EG014948 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 25302736-25312735 Theobroma cacao
Thecc1EG014948 10.0kb downstream 10.0kb downstream 10649 true scaffold_3: 25312736-25323384 Theobroma cacao
Thecc1EG014948 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 25313385-25323384 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123818277 5264 Brassicales-Malvales Singleton cluster - no MSA
124348034 5266 SBM View MSA
124247557 5268 Malvidae View MSA
124037860 5270 Rosid View MSA
123751304 5271 Pentapetalae View MSA
122797599 5272 Eudicot View MSA
122046899 5273 Angiosperm View MSA
121310670 5274 Embryophyte View MSA
123348096 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain