Gene : Thecc1EG014942 T. cacao v1.1
Defline:  (1 of 1) PTHR31707:SF60 - PECTINESTERASE INHIBITOR 1-RELATED Genomic Order:  1591
Name:  ? Thecc1EG014942 Secondary Identifier:  ? PAC:27447905
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-1081 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG014942 0.5kb upstream 0.5kb upstream 3465 true scaffold_3: 25283625-25287089 Theobroma cacao
Thecc1EG014942 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 25286590-25287089 Theobroma cacao
Thecc1EG014942 0.5kb downstream 0.5kb downstream 3465 true scaffold_3: 25283125-25286589 Theobroma cacao
Thecc1EG014942 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 25283125-25283624 Theobroma cacao
Thecc1EG014942 1.0kb upstream 1.0kb upstream 3965 true scaffold_3: 25283625-25287589 Theobroma cacao
Thecc1EG014942 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 25286590-25287589 Theobroma cacao
Thecc1EG014942 1.0kb downstream 1.0kb downstream 3965 true scaffold_3: 25282625-25286589 Theobroma cacao
Thecc1EG014942 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 25282625-25283624 Theobroma cacao
Thecc1EG014942 2.0kb upstream 2.0kb upstream 4965 true scaffold_3: 25283625-25288589 Theobroma cacao
Thecc1EG014942 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 25286590-25288589 Theobroma cacao
Thecc1EG014942 2.0kb downstream 2.0kb downstream 4965 true scaffold_3: 25281625-25286589 Theobroma cacao
Thecc1EG014942 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 25281625-25283624 Theobroma cacao
Thecc1EG014942 5.0kb upstream 5.0kb upstream 7965 true scaffold_3: 25283625-25291589 Theobroma cacao
Thecc1EG014942 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 25286590-25291589 Theobroma cacao
Thecc1EG014942 5.0kb downstream 5.0kb downstream 7965 true scaffold_3: 25278625-25286589 Theobroma cacao
Thecc1EG014942 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 25278625-25283624 Theobroma cacao
Thecc1EG014942 10.0kb upstream 10.0kb upstream 12965 true scaffold_3: 25283625-25296589 Theobroma cacao
Thecc1EG014942 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 25286590-25296589 Theobroma cacao
Thecc1EG014942 10.0kb downstream 10.0kb downstream 12965 true scaffold_3: 25273625-25286589 Theobroma cacao
Thecc1EG014942 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 25273625-25283624 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123824417 5264 Brassicales-Malvales View MSA
124347987 5266 SBM View MSA
124245744 5268 Malvidae View MSA
124070854 5270 Rosid View MSA
123751128 5271 Pentapetalae View MSA
122793966 5272 Eudicot View MSA
122051530 5273 Angiosperm View MSA
121350573 5274 Embryophyte View MSA
123381802 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain