Gene : Thecc1EG015214 T. cacao v1.1

Defline:  (1 of 1) PF00939//PF02040 - Sodium:sulfate symporter transmembrane region (Na_sulph_symp) // Arsenical pump membrane protein (ArsB) Genomic Order:  1819
Name:  ? Thecc1EG015214 Secondary Identifier:  ? PAC:27449792

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG015214 0.5kb upstream 0.5kb upstream 31294 true scaffold_3: 26785723-26817016 Theobroma cacao
Thecc1EG015214 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 26816517-26817016 Theobroma cacao
Thecc1EG015214 0.5kb downstream 0.5kb downstream 31294 true scaffold_3: 26785223-26816516 Theobroma cacao
Thecc1EG015214 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 26785223-26785722 Theobroma cacao
Thecc1EG015214 1.0kb upstream 1.0kb upstream 31794 true scaffold_3: 26785723-26817516 Theobroma cacao
Thecc1EG015214 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 26816517-26817516 Theobroma cacao
Thecc1EG015214 1.0kb downstream 1.0kb downstream 31794 true scaffold_3: 26784723-26816516 Theobroma cacao
Thecc1EG015214 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 26784723-26785722 Theobroma cacao
Thecc1EG015214 2.0kb upstream 2.0kb upstream 32794 true scaffold_3: 26785723-26818516 Theobroma cacao
Thecc1EG015214 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 26816517-26818516 Theobroma cacao
Thecc1EG015214 2.0kb downstream 2.0kb downstream 32794 true scaffold_3: 26783723-26816516 Theobroma cacao
Thecc1EG015214 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 26783723-26785722 Theobroma cacao
Thecc1EG015214 5.0kb upstream 5.0kb upstream 35794 true scaffold_3: 26785723-26821516 Theobroma cacao
Thecc1EG015214 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 26816517-26821516 Theobroma cacao
Thecc1EG015214 5.0kb downstream 5.0kb downstream 35794 true scaffold_3: 26780723-26816516 Theobroma cacao
Thecc1EG015214 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 26780723-26785722 Theobroma cacao
Thecc1EG015214 10.0kb upstream 10.0kb upstream 40794 true scaffold_3: 26785723-26826516 Theobroma cacao
Thecc1EG015214 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 26816517-26826516 Theobroma cacao
Thecc1EG015214 10.0kb downstream 10.0kb downstream 40794 true scaffold_3: 26775723-26816516 Theobroma cacao
Thecc1EG015214 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 26775723-26785722 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123829073 5264 Brassicales-Malvales View MSA
124345519 5266 SBM View MSA
124247589 5268 Malvidae View MSA
124069402 5270 Rosid View MSA
123736841 5271 Pentapetalae View MSA
122794471 5272 Eudicot View MSA
122043683 5273 Angiosperm View MSA
121350311 5274 Embryophyte View MSA
123381672 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain