Gene : Thecc1EG015201 T. cacao v1.1

Defline:  Uncharacterized protein (62%P) Genomic Order:  1811
Name:  ? Thecc1EG015201 Secondary Identifier:  ? PAC:27446711

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG015201 0.5kb upstream 0.5kb upstream 3992 true scaffold_3: 26744589-26748580 Theobroma cacao
Thecc1EG015201 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 26744589-26745088 Theobroma cacao
Thecc1EG015201 0.5kb downstream 0.5kb downstream 3992 true scaffold_3: 26745089-26749080 Theobroma cacao
Thecc1EG015201 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 26748581-26749080 Theobroma cacao
Thecc1EG015201 1.0kb upstream 1.0kb upstream 4492 true scaffold_3: 26744089-26748580 Theobroma cacao
Thecc1EG015201 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 26744089-26745088 Theobroma cacao
Thecc1EG015201 1.0kb downstream 1.0kb downstream 4492 true scaffold_3: 26745089-26749580 Theobroma cacao
Thecc1EG015201 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 26748581-26749580 Theobroma cacao
Thecc1EG015201 2.0kb upstream 2.0kb upstream 5492 true scaffold_3: 26743089-26748580 Theobroma cacao
Thecc1EG015201 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 26743089-26745088 Theobroma cacao
Thecc1EG015201 2.0kb downstream 2.0kb downstream 5492 true scaffold_3: 26745089-26750580 Theobroma cacao
Thecc1EG015201 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 26748581-26750580 Theobroma cacao
Thecc1EG015201 5.0kb upstream 5.0kb upstream 8492 true scaffold_3: 26740089-26748580 Theobroma cacao
Thecc1EG015201 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 26740089-26745088 Theobroma cacao
Thecc1EG015201 5.0kb downstream 5.0kb downstream 8492 true scaffold_3: 26745089-26753580 Theobroma cacao
Thecc1EG015201 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 26748581-26753580 Theobroma cacao
Thecc1EG015201 10.0kb upstream 10.0kb upstream 13492 true scaffold_3: 26735089-26748580 Theobroma cacao
Thecc1EG015201 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 26735089-26745088 Theobroma cacao
Thecc1EG015201 10.0kb downstream 10.0kb downstream 13492 true scaffold_3: 26745089-26758580 Theobroma cacao
Thecc1EG015201 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 26748581-26758580 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123817920 5264 Brassicales-Malvales Singleton cluster - no MSA
124349415 5266 SBM View MSA
124239201 5268 Malvidae View MSA
124062652 5270 Rosid View MSA
123744810 5271 Pentapetalae View MSA
122793484 5272 Eudicot View MSA
122043102 5273 Angiosperm View MSA
121349449 5274 Embryophyte View MSA
123381316 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain