Gene : Thecc1EG015178 T. cacao v1.1
Defline:  (1 of 1) PTHR33649:SF2 - PAR1 PROTEIN Genomic Order:  1792
Name:  ? Thecc1EG015178 Secondary Identifier:  ? PAC:27449413
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG015178 0.5kb upstream 0.5kb upstream 1692 true scaffold_3: 26610116-26611807 Theobroma cacao
Thecc1EG015178 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 26611308-26611807 Theobroma cacao
Thecc1EG015178 0.5kb downstream 0.5kb downstream 1692 true scaffold_3: 26609616-26611307 Theobroma cacao
Thecc1EG015178 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 26609616-26610115 Theobroma cacao
Thecc1EG015178 1.0kb upstream 1.0kb upstream 2192 true scaffold_3: 26610116-26612307 Theobroma cacao
Thecc1EG015178 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 26611308-26612307 Theobroma cacao
Thecc1EG015178 1.0kb downstream 1.0kb downstream 2192 true scaffold_3: 26609116-26611307 Theobroma cacao
Thecc1EG015178 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 26609116-26610115 Theobroma cacao
Thecc1EG015178 2.0kb upstream 2.0kb upstream 3192 true scaffold_3: 26610116-26613307 Theobroma cacao
Thecc1EG015178 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 26611308-26613307 Theobroma cacao
Thecc1EG015178 2.0kb downstream 2.0kb downstream 3192 true scaffold_3: 26608116-26611307 Theobroma cacao
Thecc1EG015178 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 26608116-26610115 Theobroma cacao
Thecc1EG015178 5.0kb upstream 5.0kb upstream 6192 true scaffold_3: 26610116-26616307 Theobroma cacao
Thecc1EG015178 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 26611308-26616307 Theobroma cacao
Thecc1EG015178 5.0kb downstream 5.0kb downstream 6192 true scaffold_3: 26605116-26611307 Theobroma cacao
Thecc1EG015178 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 26605116-26610115 Theobroma cacao
Thecc1EG015178 10.0kb upstream 10.0kb upstream 11192 true scaffold_3: 26610116-26621307 Theobroma cacao
Thecc1EG015178 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 26611308-26621307 Theobroma cacao
Thecc1EG015178 10.0kb downstream 10.0kb downstream 11192 true scaffold_3: 26600116-26611307 Theobroma cacao
Thecc1EG015178 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 26600116-26610115 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123832089 5264 Brassicales-Malvales View MSA
124346042 5266 SBM View MSA
124239584 5268 Malvidae View MSA
124062398 5270 Rosid View MSA
123740703 5271 Pentapetalae View MSA
122795760 5272 Eudicot View MSA
122048533 5273 Angiosperm View MSA
121349553 5274 Embryophyte View MSA
123381353 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain