Gene : Thecc1EG015168 T. cacao v1.1
Defline:  (1 of 2) PTHR22814//PTHR22814:SF52 - COPPER TRANSPORT PROTEIN ATOX1-RELATED // SUBFAMILY NOT NAMED Genomic Order:  1782
Name:  ? Thecc1EG015168 Secondary Identifier:  ? PAC:27448444
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG015168 0.5kb upstream 0.5kb upstream 1691 true scaffold_3: 26565601-26567291 Theobroma cacao
Thecc1EG015168 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 26566792-26567291 Theobroma cacao
Thecc1EG015168 0.5kb downstream 0.5kb downstream 1691 true scaffold_3: 26565101-26566791 Theobroma cacao
Thecc1EG015168 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 26565101-26565600 Theobroma cacao
Thecc1EG015168 1.0kb upstream 1.0kb upstream 2191 true scaffold_3: 26565601-26567791 Theobroma cacao
Thecc1EG015168 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 26566792-26567791 Theobroma cacao
Thecc1EG015168 1.0kb downstream 1.0kb downstream 2191 true scaffold_3: 26564601-26566791 Theobroma cacao
Thecc1EG015168 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 26564601-26565600 Theobroma cacao
Thecc1EG015168 2.0kb upstream 2.0kb upstream 3191 true scaffold_3: 26565601-26568791 Theobroma cacao
Thecc1EG015168 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 26566792-26568791 Theobroma cacao
Thecc1EG015168 2.0kb downstream 2.0kb downstream 3191 true scaffold_3: 26563601-26566791 Theobroma cacao
Thecc1EG015168 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 26563601-26565600 Theobroma cacao
Thecc1EG015168 5.0kb upstream 5.0kb upstream 6191 true scaffold_3: 26565601-26571791 Theobroma cacao
Thecc1EG015168 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 26566792-26571791 Theobroma cacao
Thecc1EG015168 5.0kb downstream 5.0kb downstream 6191 true scaffold_3: 26560601-26566791 Theobroma cacao
Thecc1EG015168 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 26560601-26565600 Theobroma cacao
Thecc1EG015168 10.0kb upstream 10.0kb upstream 11191 true scaffold_3: 26565601-26576791 Theobroma cacao
Thecc1EG015168 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 26566792-26576791 Theobroma cacao
Thecc1EG015168 10.0kb downstream 10.0kb downstream 11191 true scaffold_3: 26555601-26566791 Theobroma cacao
Thecc1EG015168 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 26555601-26565600 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123818242 5264 Brassicales-Malvales Singleton cluster - no MSA
124314562 5266 SBM Singleton cluster - no MSA
124249413 5268 Malvidae View MSA
124061014 5270 Rosid View MSA
123749167 5271 Pentapetalae View MSA
122790653 5272 Eudicot View MSA
122051560 5273 Angiosperm View MSA
121351529 5274 Embryophyte View MSA
123424750 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain