Gene : Thecc1EG015154 T. cacao v1.1
Defline:  (1 of 1) K08736 - DNA mismatch repair protein MSH3 (MSH3) Genomic Order:  1769
Name:  ? Thecc1EG015154 Secondary Identifier:  ? PAC:27450087
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG015154 0.5kb upstream 0.5kb upstream 9150 true scaffold_3: 26480790-26489939 Theobroma cacao
Thecc1EG015154 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 26489440-26489939 Theobroma cacao
Thecc1EG015154 0.5kb downstream 0.5kb downstream 9150 true scaffold_3: 26480290-26489439 Theobroma cacao
Thecc1EG015154 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 26480290-26480789 Theobroma cacao
Thecc1EG015154 1.0kb upstream 1.0kb upstream 9650 true scaffold_3: 26480790-26490439 Theobroma cacao
Thecc1EG015154 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 26489440-26490439 Theobroma cacao
Thecc1EG015154 1.0kb downstream 1.0kb downstream 9650 true scaffold_3: 26479790-26489439 Theobroma cacao
Thecc1EG015154 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 26479790-26480789 Theobroma cacao
Thecc1EG015154 2.0kb upstream 2.0kb upstream 10650 true scaffold_3: 26480790-26491439 Theobroma cacao
Thecc1EG015154 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 26489440-26491439 Theobroma cacao
Thecc1EG015154 2.0kb downstream 2.0kb downstream 10650 true scaffold_3: 26478790-26489439 Theobroma cacao
Thecc1EG015154 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 26478790-26480789 Theobroma cacao
Thecc1EG015154 5.0kb upstream 5.0kb upstream 13650 true scaffold_3: 26480790-26494439 Theobroma cacao
Thecc1EG015154 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 26489440-26494439 Theobroma cacao
Thecc1EG015154 5.0kb downstream 5.0kb downstream 13650 true scaffold_3: 26475790-26489439 Theobroma cacao
Thecc1EG015154 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 26475790-26480789 Theobroma cacao
Thecc1EG015154 10.0kb upstream 10.0kb upstream 18650 true scaffold_3: 26480790-26499439 Theobroma cacao
Thecc1EG015154 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 26489440-26499439 Theobroma cacao
Thecc1EG015154 10.0kb downstream 10.0kb downstream 18650 true scaffold_3: 26470790-26489439 Theobroma cacao
Thecc1EG015154 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 26470790-26480789 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123829989 5264 Brassicales-Malvales View MSA
124340255 5266 SBM View MSA
124240646 5268 Malvidae View MSA
124067254 5270 Rosid View MSA
123737421 5271 Pentapetalae View MSA
122792724 5272 Eudicot View MSA
122046515 5273 Angiosperm View MSA
121349406 5274 Embryophyte View MSA
123426480 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain