Gene : Thecc1EG015358 T. cacao v1.1
Defline:  (1 of 1) PTHR23076:SF40 - ATP-DEPENDENT ZINC METALLOPROTEASE FTSH 11, CHLOROPLASTIC/MITOCHONDRIAL Genomic Order:  1946
Name:  ? Thecc1EG015358 Secondary Identifier:  ? PAC:27449895
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG015358 0.5kb upstream 0.5kb upstream 16132 true scaffold_3: 27524016-27540147 Theobroma cacao
Thecc1EG015358 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 27524016-27524515 Theobroma cacao
Thecc1EG015358 0.5kb downstream 0.5kb downstream 16132 true scaffold_3: 27524516-27540647 Theobroma cacao
Thecc1EG015358 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 27540148-27540647 Theobroma cacao
Thecc1EG015358 1.0kb upstream 1.0kb upstream 16632 true scaffold_3: 27523516-27540147 Theobroma cacao
Thecc1EG015358 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 27523516-27524515 Theobroma cacao
Thecc1EG015358 1.0kb downstream 1.0kb downstream 16632 true scaffold_3: 27524516-27541147 Theobroma cacao
Thecc1EG015358 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 27540148-27541147 Theobroma cacao
Thecc1EG015358 2.0kb upstream 2.0kb upstream 17632 true scaffold_3: 27522516-27540147 Theobroma cacao
Thecc1EG015358 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 27522516-27524515 Theobroma cacao
Thecc1EG015358 2.0kb downstream 2.0kb downstream 17632 true scaffold_3: 27524516-27542147 Theobroma cacao
Thecc1EG015358 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 27540148-27542147 Theobroma cacao
Thecc1EG015358 5.0kb upstream 5.0kb upstream 20632 true scaffold_3: 27519516-27540147 Theobroma cacao
Thecc1EG015358 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 27519516-27524515 Theobroma cacao
Thecc1EG015358 5.0kb downstream 5.0kb downstream 20632 true scaffold_3: 27524516-27545147 Theobroma cacao
Thecc1EG015358 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 27540148-27545147 Theobroma cacao
Thecc1EG015358 10.0kb upstream 10.0kb upstream 25632 true scaffold_3: 27514516-27540147 Theobroma cacao
Thecc1EG015358 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 27514516-27524515 Theobroma cacao
Thecc1EG015358 10.0kb downstream 10.0kb downstream 25632 true scaffold_3: 27524516-27550147 Theobroma cacao
Thecc1EG015358 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 27540148-27550147 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123833688 5264 Brassicales-Malvales View MSA
124321889 5266 SBM View MSA
124253542 5268 Malvidae View MSA
124073797 5270 Rosid View MSA
123744222 5271 Pentapetalae View MSA
122793624 5272 Eudicot View MSA
122043793 5273 Angiosperm View MSA
121346284 5274 Embryophyte View MSA
123428638 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain