Gene : Thecc1EG015361 T. cacao v1.1
Defline:  (1 of 1) PTHR10788//PTHR10788:SF39 - TREHALOSE-6-PHOSPHATE SYNTHASE // SUBFAMILY NOT NAMED Genomic Order:  1948
Name:  ? Thecc1EG015361 Secondary Identifier:  ? PAC:27449743
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG015361 0.5kb upstream 0.5kb upstream 10179 true scaffold_3: 27550144-27560322 Theobroma cacao
Thecc1EG015361 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 27559823-27560322 Theobroma cacao
Thecc1EG015361 0.5kb downstream 0.5kb downstream 10179 true scaffold_3: 27549644-27559822 Theobroma cacao
Thecc1EG015361 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 27549644-27550143 Theobroma cacao
Thecc1EG015361 1.0kb upstream 1.0kb upstream 10679 true scaffold_3: 27550144-27560822 Theobroma cacao
Thecc1EG015361 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 27559823-27560822 Theobroma cacao
Thecc1EG015361 1.0kb downstream 1.0kb downstream 10679 true scaffold_3: 27549144-27559822 Theobroma cacao
Thecc1EG015361 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 27549144-27550143 Theobroma cacao
Thecc1EG015361 2.0kb upstream 2.0kb upstream 11679 true scaffold_3: 27550144-27561822 Theobroma cacao
Thecc1EG015361 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 27559823-27561822 Theobroma cacao
Thecc1EG015361 2.0kb downstream 2.0kb downstream 11679 true scaffold_3: 27548144-27559822 Theobroma cacao
Thecc1EG015361 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 27548144-27550143 Theobroma cacao
Thecc1EG015361 5.0kb upstream 5.0kb upstream 14679 true scaffold_3: 27550144-27564822 Theobroma cacao
Thecc1EG015361 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 27559823-27564822 Theobroma cacao
Thecc1EG015361 5.0kb downstream 5.0kb downstream 14679 true scaffold_3: 27545144-27559822 Theobroma cacao
Thecc1EG015361 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 27545144-27550143 Theobroma cacao
Thecc1EG015361 10.0kb upstream 10.0kb upstream 19679 true scaffold_3: 27550144-27569822 Theobroma cacao
Thecc1EG015361 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 27559823-27569822 Theobroma cacao
Thecc1EG015361 10.0kb downstream 10.0kb downstream 19679 true scaffold_3: 27540144-27559822 Theobroma cacao
Thecc1EG015361 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 27540144-27550143 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123825291 5264 Brassicales-Malvales View MSA
124347681 5266 SBM View MSA
124247426 5268 Malvidae View MSA
124071032 5270 Rosid View MSA
123748006 5271 Pentapetalae View MSA
122793919 5272 Eudicot View MSA
122048868 5273 Angiosperm View MSA
121311146 5274 Embryophyte View MSA
123427869 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain