Gene : Thecc1EG015351 T. cacao v1.1

Defline:  (1 of 3) PTHR10641//PTHR10641:SF620 - MYB-LIKE DNA-BINDING PROTEIN MYB // SUBFAMILY NOT NAMED Genomic Order:  1940
Name:  ? Thecc1EG015351 Secondary Identifier:  ? PAC:27446813

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG015351 0.5kb upstream 0.5kb upstream 1465 true scaffold_3: 27485429-27486893 Theobroma cacao
Thecc1EG015351 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 27486394-27486893 Theobroma cacao
Thecc1EG015351 0.5kb downstream 0.5kb downstream 1465 true scaffold_3: 27484929-27486393 Theobroma cacao
Thecc1EG015351 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 27484929-27485428 Theobroma cacao
Thecc1EG015351 1.0kb upstream 1.0kb upstream 1965 true scaffold_3: 27485429-27487393 Theobroma cacao
Thecc1EG015351 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 27486394-27487393 Theobroma cacao
Thecc1EG015351 1.0kb downstream 1.0kb downstream 1965 true scaffold_3: 27484429-27486393 Theobroma cacao
Thecc1EG015351 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 27484429-27485428 Theobroma cacao
Thecc1EG015351 2.0kb upstream 2.0kb upstream 2965 true scaffold_3: 27485429-27488393 Theobroma cacao
Thecc1EG015351 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 27486394-27488393 Theobroma cacao
Thecc1EG015351 2.0kb downstream 2.0kb downstream 2965 true scaffold_3: 27483429-27486393 Theobroma cacao
Thecc1EG015351 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 27483429-27485428 Theobroma cacao
Thecc1EG015351 5.0kb upstream 5.0kb upstream 5965 true scaffold_3: 27485429-27491393 Theobroma cacao
Thecc1EG015351 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 27486394-27491393 Theobroma cacao
Thecc1EG015351 5.0kb downstream 5.0kb downstream 5965 true scaffold_3: 27480429-27486393 Theobroma cacao
Thecc1EG015351 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 27480429-27485428 Theobroma cacao
Thecc1EG015351 10.0kb upstream 10.0kb upstream 10965 true scaffold_3: 27485429-27496393 Theobroma cacao
Thecc1EG015351 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 27486394-27496393 Theobroma cacao
Thecc1EG015351 10.0kb downstream 10.0kb downstream 10965 true scaffold_3: 27475429-27486393 Theobroma cacao
Thecc1EG015351 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 27475429-27485428 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123838549 5264 Brassicales-Malvales View MSA
124346674 5266 SBM View MSA
124248626 5268 Malvidae View MSA
124069524 5270 Rosid View MSA
123746373 5271 Pentapetalae View MSA
122789171 5272 Eudicot View MSA
122050694 5273 Angiosperm View MSA
121312073 5274 Embryophyte View MSA
123349278 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain