Gene : Thecc1EG015329 T. cacao v1.1
Defline:  (1 of 6) PF00560//PF07714//PF08263 - Leucine Rich Repeat (LRR_1) // Protein tyrosine kinase (Pkinase_Tyr) // Leucine rich repeat N-terminal domain (LRRNT_2) Genomic Order:  1921
Name:  ? Thecc1EG015329 Secondary Identifier:  ? PAC:27447418
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG015329 0.5kb upstream 0.5kb upstream 4430 true scaffold_3: 27395256-27399685 Theobroma cacao
Thecc1EG015329 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 27395256-27395755 Theobroma cacao
Thecc1EG015329 0.5kb downstream 0.5kb downstream 4430 true scaffold_3: 27395756-27400185 Theobroma cacao
Thecc1EG015329 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 27399686-27400185 Theobroma cacao
Thecc1EG015329 1.0kb upstream 1.0kb upstream 4930 true scaffold_3: 27394756-27399685 Theobroma cacao
Thecc1EG015329 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 27394756-27395755 Theobroma cacao
Thecc1EG015329 1.0kb downstream 1.0kb downstream 4930 true scaffold_3: 27395756-27400685 Theobroma cacao
Thecc1EG015329 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 27399686-27400685 Theobroma cacao
Thecc1EG015329 2.0kb upstream 2.0kb upstream 5930 true scaffold_3: 27393756-27399685 Theobroma cacao
Thecc1EG015329 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 27393756-27395755 Theobroma cacao
Thecc1EG015329 2.0kb downstream 2.0kb downstream 5930 true scaffold_3: 27395756-27401685 Theobroma cacao
Thecc1EG015329 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 27399686-27401685 Theobroma cacao
Thecc1EG015329 5.0kb upstream 5.0kb upstream 8930 true scaffold_3: 27390756-27399685 Theobroma cacao
Thecc1EG015329 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 27390756-27395755 Theobroma cacao
Thecc1EG015329 5.0kb downstream 5.0kb downstream 8930 true scaffold_3: 27395756-27404685 Theobroma cacao
Thecc1EG015329 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 27399686-27404685 Theobroma cacao
Thecc1EG015329 10.0kb upstream 10.0kb upstream 13930 true scaffold_3: 27385756-27399685 Theobroma cacao
Thecc1EG015329 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 27385756-27395755 Theobroma cacao
Thecc1EG015329 10.0kb downstream 10.0kb downstream 13930 true scaffold_3: 27395756-27409685 Theobroma cacao
Thecc1EG015329 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 27399686-27409685 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026275 5273 Angiosperm View MSA
123825453 5264 Brassicales-Malvales View MSA
124349071 5266 SBM View MSA
124247115 5268 Malvidae View MSA
124069725 5270 Rosid View MSA
123742624 5271 Pentapetalae View MSA
122793300 5272 Eudicot View MSA
121296256 5274 Embryophyte View MSA
123334452 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain