Gene : Thecc1EG015315 T. cacao v1.1
Defline:  LIM domain-containing protein A Genomic Order:  1910
Name:  ? Thecc1EG015315 Secondary Identifier:  ? PAC:27447085
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG015315 0.5kb upstream 0.5kb upstream 6437 true scaffold_3: 27322102-27328538 Theobroma cacao
Thecc1EG015315 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 27328039-27328538 Theobroma cacao
Thecc1EG015315 0.5kb downstream 0.5kb downstream 6437 true scaffold_3: 27321602-27328038 Theobroma cacao
Thecc1EG015315 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 27321602-27322101 Theobroma cacao
Thecc1EG015315 1.0kb upstream 1.0kb upstream 6937 true scaffold_3: 27322102-27329038 Theobroma cacao
Thecc1EG015315 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 27328039-27329038 Theobroma cacao
Thecc1EG015315 1.0kb downstream 1.0kb downstream 6937 true scaffold_3: 27321102-27328038 Theobroma cacao
Thecc1EG015315 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 27321102-27322101 Theobroma cacao
Thecc1EG015315 2.0kb upstream 2.0kb upstream 7937 true scaffold_3: 27322102-27330038 Theobroma cacao
Thecc1EG015315 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 27328039-27330038 Theobroma cacao
Thecc1EG015315 2.0kb downstream 2.0kb downstream 7937 true scaffold_3: 27320102-27328038 Theobroma cacao
Thecc1EG015315 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 27320102-27322101 Theobroma cacao
Thecc1EG015315 5.0kb upstream 5.0kb upstream 10937 true scaffold_3: 27322102-27333038 Theobroma cacao
Thecc1EG015315 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 27328039-27333038 Theobroma cacao
Thecc1EG015315 5.0kb downstream 5.0kb downstream 10937 true scaffold_3: 27317102-27328038 Theobroma cacao
Thecc1EG015315 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 27317102-27322101 Theobroma cacao
Thecc1EG015315 10.0kb upstream 10.0kb upstream 15937 true scaffold_3: 27322102-27338038 Theobroma cacao
Thecc1EG015315 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 27328039-27338038 Theobroma cacao
Thecc1EG015315 10.0kb downstream 10.0kb downstream 15937 true scaffold_3: 27312102-27328038 Theobroma cacao
Thecc1EG015315 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 27312102-27322101 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123832339 5264 Brassicales-Malvales View MSA
124321795 5266 SBM View MSA
124242482 5268 Malvidae View MSA
124069218 5270 Rosid View MSA
123740023 5271 Pentapetalae View MSA
122796084 5272 Eudicot View MSA
122042830 5273 Angiosperm View MSA
121310031 5274 Embryophyte View MSA
123347634 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain