Gene : Thecc1EG015267 T. cacao v1.1
Defline:  (1 of 427) PF01535 - PPR repeat (PPR) Genomic Order:  1866
Name:  ? Thecc1EG015267 Secondary Identifier:  ? PAC:27450228
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG015267 0.5kb upstream 0.5kb upstream 3047 true scaffold_3: 27060054-27063100 Theobroma cacao
Thecc1EG015267 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 27060054-27060553 Theobroma cacao
Thecc1EG015267 0.5kb downstream 0.5kb downstream 3047 true scaffold_3: 27060554-27063600 Theobroma cacao
Thecc1EG015267 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 27063101-27063600 Theobroma cacao
Thecc1EG015267 1.0kb upstream 1.0kb upstream 3547 true scaffold_3: 27059554-27063100 Theobroma cacao
Thecc1EG015267 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 27059554-27060553 Theobroma cacao
Thecc1EG015267 1.0kb downstream 1.0kb downstream 3547 true scaffold_3: 27060554-27064100 Theobroma cacao
Thecc1EG015267 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 27063101-27064100 Theobroma cacao
Thecc1EG015267 2.0kb upstream 2.0kb upstream 4547 true scaffold_3: 27058554-27063100 Theobroma cacao
Thecc1EG015267 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 27058554-27060553 Theobroma cacao
Thecc1EG015267 2.0kb downstream 2.0kb downstream 4547 true scaffold_3: 27060554-27065100 Theobroma cacao
Thecc1EG015267 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 27063101-27065100 Theobroma cacao
Thecc1EG015267 5.0kb upstream 5.0kb upstream 7547 true scaffold_3: 27055554-27063100 Theobroma cacao
Thecc1EG015267 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 27055554-27060553 Theobroma cacao
Thecc1EG015267 5.0kb downstream 5.0kb downstream 7547 true scaffold_3: 27060554-27068100 Theobroma cacao
Thecc1EG015267 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 27063101-27068100 Theobroma cacao
Thecc1EG015267 10.0kb upstream 10.0kb upstream 12547 true scaffold_3: 27050554-27063100 Theobroma cacao
Thecc1EG015267 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 27050554-27060553 Theobroma cacao
Thecc1EG015267 10.0kb downstream 10.0kb downstream 12547 true scaffold_3: 27060554-27073100 Theobroma cacao
Thecc1EG015267 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 27063101-27073100 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123839603 5264 Brassicales-Malvales View MSA
124341108 5266 SBM View MSA
124237119 5268 Malvidae View MSA
124068830 5270 Rosid View MSA
123749334 5271 Pentapetalae View MSA
122792381 5272 Eudicot View MSA
122041960 5273 Angiosperm View MSA
121348427 5274 Embryophyte View MSA
123380862 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain