Gene : Thecc1EG015260 T. cacao v1.1
Defline:  (1 of 1) PTHR22814//PTHR22814:SF129 - COPPER TRANSPORT PROTEIN ATOX1-RELATED // COPPER TRANSPORT FAMILY PROTEIN-RELATED Genomic Order:  1860
Name:  ? Thecc1EG015260 Secondary Identifier:  ? PAC:27447416
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG015260 0.5kb upstream 0.5kb upstream 1523 true scaffold_3: 27038250-27039772 Theobroma cacao
Thecc1EG015260 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 27038250-27038749 Theobroma cacao
Thecc1EG015260 0.5kb downstream 0.5kb downstream 1523 true scaffold_3: 27038750-27040272 Theobroma cacao
Thecc1EG015260 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 27039773-27040272 Theobroma cacao
Thecc1EG015260 1.0kb upstream 1.0kb upstream 2023 true scaffold_3: 27037750-27039772 Theobroma cacao
Thecc1EG015260 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 27037750-27038749 Theobroma cacao
Thecc1EG015260 1.0kb downstream 1.0kb downstream 2023 true scaffold_3: 27038750-27040772 Theobroma cacao
Thecc1EG015260 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 27039773-27040772 Theobroma cacao
Thecc1EG015260 2.0kb upstream 2.0kb upstream 3023 true scaffold_3: 27036750-27039772 Theobroma cacao
Thecc1EG015260 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 27036750-27038749 Theobroma cacao
Thecc1EG015260 2.0kb downstream 2.0kb downstream 3023 true scaffold_3: 27038750-27041772 Theobroma cacao
Thecc1EG015260 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 27039773-27041772 Theobroma cacao
Thecc1EG015260 5.0kb upstream 5.0kb upstream 6023 true scaffold_3: 27033750-27039772 Theobroma cacao
Thecc1EG015260 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 27033750-27038749 Theobroma cacao
Thecc1EG015260 5.0kb downstream 5.0kb downstream 6023 true scaffold_3: 27038750-27044772 Theobroma cacao
Thecc1EG015260 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 27039773-27044772 Theobroma cacao
Thecc1EG015260 10.0kb upstream 10.0kb upstream 11023 true scaffold_3: 27028750-27039772 Theobroma cacao
Thecc1EG015260 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 27028750-27038749 Theobroma cacao
Thecc1EG015260 10.0kb downstream 10.0kb downstream 11023 true scaffold_3: 27038750-27049772 Theobroma cacao
Thecc1EG015260 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 27039773-27049772 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123838445 5264 Brassicales-Malvales View MSA
124349979 5266 SBM View MSA
124250678 5268 Malvidae View MSA
124072200 5270 Rosid View MSA
123751300 5271 Pentapetalae View MSA
122793053 5272 Eudicot View MSA
122051560 5273 Angiosperm View MSA
121351529 5274 Embryophyte View MSA
123424750 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain