Gene : Thecc1EG015256 T. cacao v1.1
Defline:  (1 of 1) PTHR23273//PTHR23273:SF10 - REPLICATION FACTOR A 1, RFA1 // SUBFAMILY NOT NAMED Genomic Order:  1858
Name:  ? Thecc1EG015256 Secondary Identifier:  ? PAC:27450375
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG015256 0.5kb upstream 0.5kb upstream 11259 true scaffold_3: 27022361-27033619 Theobroma cacao
Thecc1EG015256 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 27022361-27022860 Theobroma cacao
Thecc1EG015256 0.5kb downstream 0.5kb downstream 11259 true scaffold_3: 27022861-27034119 Theobroma cacao
Thecc1EG015256 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 27033620-27034119 Theobroma cacao
Thecc1EG015256 1.0kb upstream 1.0kb upstream 11759 true scaffold_3: 27021861-27033619 Theobroma cacao
Thecc1EG015256 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 27021861-27022860 Theobroma cacao
Thecc1EG015256 1.0kb downstream 1.0kb downstream 11759 true scaffold_3: 27022861-27034619 Theobroma cacao
Thecc1EG015256 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 27033620-27034619 Theobroma cacao
Thecc1EG015256 2.0kb upstream 2.0kb upstream 12759 true scaffold_3: 27020861-27033619 Theobroma cacao
Thecc1EG015256 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 27020861-27022860 Theobroma cacao
Thecc1EG015256 2.0kb downstream 2.0kb downstream 12759 true scaffold_3: 27022861-27035619 Theobroma cacao
Thecc1EG015256 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 27033620-27035619 Theobroma cacao
Thecc1EG015256 5.0kb upstream 5.0kb upstream 15759 true scaffold_3: 27017861-27033619 Theobroma cacao
Thecc1EG015256 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 27017861-27022860 Theobroma cacao
Thecc1EG015256 5.0kb downstream 5.0kb downstream 15759 true scaffold_3: 27022861-27038619 Theobroma cacao
Thecc1EG015256 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 27033620-27038619 Theobroma cacao
Thecc1EG015256 10.0kb upstream 10.0kb upstream 20759 true scaffold_3: 27012861-27033619 Theobroma cacao
Thecc1EG015256 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 27012861-27022860 Theobroma cacao
Thecc1EG015256 10.0kb downstream 10.0kb downstream 20759 true scaffold_3: 27022861-27043619 Theobroma cacao
Thecc1EG015256 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 27033620-27043619 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029830 5273 Angiosperm View MSA
123828875 5264 Brassicales-Malvales View MSA
124321561 5266 SBM View MSA
124251230 5268 Malvidae View MSA
124073687 5270 Rosid View MSA
123753150 5271 Pentapetalae View MSA
122797947 5272 Eudicot View MSA
121351580 5274 Embryophyte View MSA
123426292 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain