Gene : Thecc1EG015232 T. cacao v1.1
Defline:  (1 of 1) PTHR11972//PTHR11972:SF79 - NADPH OXIDASE // SUBFAMILY NOT NAMED Genomic Order:  1837
Name:  ? Thecc1EG015232 Secondary Identifier:  ? PAC:27450467
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-5934 Theobroma cacao pathologic  
Tcacao PWY-6854 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG015232 0.5kb upstream 0.5kb upstream 4440 true scaffold_3: 26928395-26932834 Theobroma cacao
Thecc1EG015232 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 26932335-26932834 Theobroma cacao
Thecc1EG015232 0.5kb downstream 0.5kb downstream 4440 true scaffold_3: 26927895-26932334 Theobroma cacao
Thecc1EG015232 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 26927895-26928394 Theobroma cacao
Thecc1EG015232 1.0kb upstream 1.0kb upstream 4940 true scaffold_3: 26928395-26933334 Theobroma cacao
Thecc1EG015232 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 26932335-26933334 Theobroma cacao
Thecc1EG015232 1.0kb downstream 1.0kb downstream 4940 true scaffold_3: 26927395-26932334 Theobroma cacao
Thecc1EG015232 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 26927395-26928394 Theobroma cacao
Thecc1EG015232 2.0kb upstream 2.0kb upstream 5940 true scaffold_3: 26928395-26934334 Theobroma cacao
Thecc1EG015232 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 26932335-26934334 Theobroma cacao
Thecc1EG015232 2.0kb downstream 2.0kb downstream 5940 true scaffold_3: 26926395-26932334 Theobroma cacao
Thecc1EG015232 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 26926395-26928394 Theobroma cacao
Thecc1EG015232 5.0kb upstream 5.0kb upstream 8940 true scaffold_3: 26928395-26937334 Theobroma cacao
Thecc1EG015232 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 26932335-26937334 Theobroma cacao
Thecc1EG015232 5.0kb downstream 5.0kb downstream 8940 true scaffold_3: 26923395-26932334 Theobroma cacao
Thecc1EG015232 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 26923395-26928394 Theobroma cacao
Thecc1EG015232 10.0kb upstream 10.0kb upstream 13940 true scaffold_3: 26928395-26942334 Theobroma cacao
Thecc1EG015232 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 26932335-26942334 Theobroma cacao
Thecc1EG015232 10.0kb downstream 10.0kb downstream 13940 true scaffold_3: 26918395-26932334 Theobroma cacao
Thecc1EG015232 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 26918395-26928394 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123823989 5264 Brassicales-Malvales View MSA
124348861 5266 SBM View MSA
124250584 5268 Malvidae View MSA
124071281 5270 Rosid View MSA
123746738 5271 Pentapetalae View MSA
122787767 5272 Eudicot View MSA
122051677 5273 Angiosperm View MSA
121345980 5274 Embryophyte View MSA
123428579 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain