Gene : Thecc1EG015233 T. cacao v1.1
Defline:  (1 of 1) PTHR11972//PTHR11972:SF62 - NADPH OXIDASE // FERRIC REDUCTION OXIDASE 4-RELATED Genomic Order:  1838
Name:  ? Thecc1EG015233 Secondary Identifier:  ? PAC:27451318
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-5934 Theobroma cacao pathologic  
Tcacao PWY-6854 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG015233 0.5kb upstream 0.5kb upstream 4884 true scaffold_3: 26933790-26938673 Theobroma cacao
Thecc1EG015233 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 26938174-26938673 Theobroma cacao
Thecc1EG015233 0.5kb downstream 0.5kb downstream 4884 true scaffold_3: 26933290-26938173 Theobroma cacao
Thecc1EG015233 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 26933290-26933789 Theobroma cacao
Thecc1EG015233 1.0kb upstream 1.0kb upstream 5384 true scaffold_3: 26933790-26939173 Theobroma cacao
Thecc1EG015233 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 26938174-26939173 Theobroma cacao
Thecc1EG015233 1.0kb downstream 1.0kb downstream 5384 true scaffold_3: 26932790-26938173 Theobroma cacao
Thecc1EG015233 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 26932790-26933789 Theobroma cacao
Thecc1EG015233 2.0kb upstream 2.0kb upstream 6384 true scaffold_3: 26933790-26940173 Theobroma cacao
Thecc1EG015233 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 26938174-26940173 Theobroma cacao
Thecc1EG015233 2.0kb downstream 2.0kb downstream 6384 true scaffold_3: 26931790-26938173 Theobroma cacao
Thecc1EG015233 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 26931790-26933789 Theobroma cacao
Thecc1EG015233 5.0kb upstream 5.0kb upstream 9384 true scaffold_3: 26933790-26943173 Theobroma cacao
Thecc1EG015233 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 26938174-26943173 Theobroma cacao
Thecc1EG015233 5.0kb downstream 5.0kb downstream 9384 true scaffold_3: 26928790-26938173 Theobroma cacao
Thecc1EG015233 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 26928790-26933789 Theobroma cacao
Thecc1EG015233 10.0kb upstream 10.0kb upstream 14384 true scaffold_3: 26933790-26948173 Theobroma cacao
Thecc1EG015233 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 26938174-26948173 Theobroma cacao
Thecc1EG015233 10.0kb downstream 10.0kb downstream 14384 true scaffold_3: 26923790-26938173 Theobroma cacao
Thecc1EG015233 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 26923790-26933789 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123827837 5264 Brassicales-Malvales View MSA
124321489 5266 SBM View MSA
124252171 5268 Malvidae View MSA
124071281 5270 Rosid View MSA
123746738 5271 Pentapetalae View MSA
122787767 5272 Eudicot View MSA
122051677 5273 Angiosperm View MSA
121345980 5274 Embryophyte View MSA
123428579 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain