Gene : Thecc1EG015405 T. cacao v1.1
Defline:  (1 of 4) PTHR31790//PTHR31790:SF10 - FAMILY NOT NAMED // F-BOX ASSOCIATED UBIQUITINATION EFFECTOR FAMILY PROTEIN-RELATED Genomic Order:  1984
Name:  ? Thecc1EG015405 Secondary Identifier:  ? PAC:27448963
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG015405 0.5kb upstream 0.5kb upstream 12189 true scaffold_3: 27780887-27793075 Theobroma cacao
Thecc1EG015405 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 27780887-27781386 Theobroma cacao
Thecc1EG015405 0.5kb downstream 0.5kb downstream 12189 true scaffold_3: 27781387-27793575 Theobroma cacao
Thecc1EG015405 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 27793076-27793575 Theobroma cacao
Thecc1EG015405 1.0kb upstream 1.0kb upstream 12689 true scaffold_3: 27780387-27793075 Theobroma cacao
Thecc1EG015405 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 27780387-27781386 Theobroma cacao
Thecc1EG015405 1.0kb downstream 1.0kb downstream 12689 true scaffold_3: 27781387-27794075 Theobroma cacao
Thecc1EG015405 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 27793076-27794075 Theobroma cacao
Thecc1EG015405 2.0kb upstream 2.0kb upstream 13689 true scaffold_3: 27779387-27793075 Theobroma cacao
Thecc1EG015405 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 27779387-27781386 Theobroma cacao
Thecc1EG015405 2.0kb downstream 2.0kb downstream 13689 true scaffold_3: 27781387-27795075 Theobroma cacao
Thecc1EG015405 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 27793076-27795075 Theobroma cacao
Thecc1EG015405 5.0kb upstream 5.0kb upstream 16689 true scaffold_3: 27776387-27793075 Theobroma cacao
Thecc1EG015405 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 27776387-27781386 Theobroma cacao
Thecc1EG015405 5.0kb downstream 5.0kb downstream 16689 true scaffold_3: 27781387-27798075 Theobroma cacao
Thecc1EG015405 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 27793076-27798075 Theobroma cacao
Thecc1EG015405 10.0kb upstream 10.0kb upstream 21689 true scaffold_3: 27771387-27793075 Theobroma cacao
Thecc1EG015405 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 27771387-27781386 Theobroma cacao
Thecc1EG015405 10.0kb downstream 10.0kb downstream 21689 true scaffold_3: 27781387-27803075 Theobroma cacao
Thecc1EG015405 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 27793076-27803075 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123827006 5264 Brassicales-Malvales View MSA
124351215 5266 SBM View MSA
124254638 5268 Malvidae View MSA
124074667 5270 Rosid View MSA
123753263 5271 Pentapetalae View MSA
122797953 5272 Eudicot View MSA
122051694 5273 Angiosperm View MSA
121351156 5274 Embryophyte View MSA
123382030 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain