Gene : Thecc1EG015407 T. cacao v1.1
Defline:  (1 of 1) PTHR31707:SF8 - PECTINESTERASE/PECTINESTERASE INHIBITOR 34-RELATED Genomic Order:  1986
Name:  ? Thecc1EG015407 Secondary Identifier:  ? PAC:27450421
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-1081 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG015407 0.5kb upstream 0.5kb upstream 4690 true scaffold_3: 27794989-27799678 Theobroma cacao
Thecc1EG015407 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 27794989-27795488 Theobroma cacao
Thecc1EG015407 0.5kb downstream 0.5kb downstream 4690 true scaffold_3: 27795489-27800178 Theobroma cacao
Thecc1EG015407 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 27799679-27800178 Theobroma cacao
Thecc1EG015407 1.0kb upstream 1.0kb upstream 5190 true scaffold_3: 27794489-27799678 Theobroma cacao
Thecc1EG015407 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 27794489-27795488 Theobroma cacao
Thecc1EG015407 1.0kb downstream 1.0kb downstream 5190 true scaffold_3: 27795489-27800678 Theobroma cacao
Thecc1EG015407 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 27799679-27800678 Theobroma cacao
Thecc1EG015407 2.0kb upstream 2.0kb upstream 6190 true scaffold_3: 27793489-27799678 Theobroma cacao
Thecc1EG015407 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 27793489-27795488 Theobroma cacao
Thecc1EG015407 2.0kb downstream 2.0kb downstream 6190 true scaffold_3: 27795489-27801678 Theobroma cacao
Thecc1EG015407 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 27799679-27801678 Theobroma cacao
Thecc1EG015407 5.0kb upstream 5.0kb upstream 9190 true scaffold_3: 27790489-27799678 Theobroma cacao
Thecc1EG015407 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 27790489-27795488 Theobroma cacao
Thecc1EG015407 5.0kb downstream 5.0kb downstream 9190 true scaffold_3: 27795489-27804678 Theobroma cacao
Thecc1EG015407 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 27799679-27804678 Theobroma cacao
Thecc1EG015407 10.0kb upstream 10.0kb upstream 14190 true scaffold_3: 27785489-27799678 Theobroma cacao
Thecc1EG015407 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 27785489-27795488 Theobroma cacao
Thecc1EG015407 10.0kb downstream 10.0kb downstream 14190 true scaffold_3: 27795489-27809678 Theobroma cacao
Thecc1EG015407 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 27799679-27809678 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123838000 5264 Brassicales-Malvales View MSA
124337628 5266 SBM View MSA
124239188 5268 Malvidae View MSA
124065220 5270 Rosid View MSA
123746199 5271 Pentapetalae View MSA
122794152 5272 Eudicot View MSA
122043800 5273 Angiosperm View MSA
121350573 5274 Embryophyte View MSA
123381802 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain