Gene : Thecc1EG015413 T. cacao v1.1
Defline:  (1 of 191) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Genomic Order:  1992
Name:  ? Thecc1EG015413 Secondary Identifier:  ? PAC:27449924
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG015413 0.5kb upstream 0.5kb upstream 7059 true scaffold_3: 27824869-27831927 Theobroma cacao
Thecc1EG015413 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 27824869-27825368 Theobroma cacao
Thecc1EG015413 0.5kb downstream 0.5kb downstream 7059 true scaffold_3: 27825369-27832427 Theobroma cacao
Thecc1EG015413 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 27831928-27832427 Theobroma cacao
Thecc1EG015413 1.0kb upstream 1.0kb upstream 7559 true scaffold_3: 27824369-27831927 Theobroma cacao
Thecc1EG015413 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 27824369-27825368 Theobroma cacao
Thecc1EG015413 1.0kb downstream 1.0kb downstream 7559 true scaffold_3: 27825369-27832927 Theobroma cacao
Thecc1EG015413 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 27831928-27832927 Theobroma cacao
Thecc1EG015413 2.0kb upstream 2.0kb upstream 8559 true scaffold_3: 27823369-27831927 Theobroma cacao
Thecc1EG015413 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 27823369-27825368 Theobroma cacao
Thecc1EG015413 2.0kb downstream 2.0kb downstream 8559 true scaffold_3: 27825369-27833927 Theobroma cacao
Thecc1EG015413 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 27831928-27833927 Theobroma cacao
Thecc1EG015413 5.0kb upstream 5.0kb upstream 11559 true scaffold_3: 27820369-27831927 Theobroma cacao
Thecc1EG015413 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 27820369-27825368 Theobroma cacao
Thecc1EG015413 5.0kb downstream 5.0kb downstream 11559 true scaffold_3: 27825369-27836927 Theobroma cacao
Thecc1EG015413 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 27831928-27836927 Theobroma cacao
Thecc1EG015413 10.0kb upstream 10.0kb upstream 16559 true scaffold_3: 27815369-27831927 Theobroma cacao
Thecc1EG015413 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 27815369-27825368 Theobroma cacao
Thecc1EG015413 10.0kb downstream 10.0kb downstream 16559 true scaffold_3: 27825369-27841927 Theobroma cacao
Thecc1EG015413 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 27831928-27841927 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123830662 5264 Brassicales-Malvales View MSA
124345517 5266 SBM View MSA
124252608 5268 Malvidae View MSA
124060522 5270 Rosid View MSA
123738847 5271 Pentapetalae View MSA
122790244 5272 Eudicot View MSA
122041559 5273 Angiosperm View MSA
121309863 5274 Embryophyte View MSA
123347506 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain