Gene : Thecc1EG015379 T. cacao v1.1
Defline:  (1 of 1) 1.4.1.14 - Glutamate synthase (NADH) / NADH-glutamate synthase Genomic Order:  1964
Name:  ? Thecc1EG015379 Secondary Identifier:  ? PAC:27446656
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao GLUGLNSYN-PWY Theobroma cacao pathologic  
Tcacao PWY-3282 Theobroma cacao pathologic  
Tcacao PWY-6963 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG015379 0.5kb upstream 0.5kb upstream 16763 true scaffold_3: 27637059-27653821 Theobroma cacao
Thecc1EG015379 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 27653322-27653821 Theobroma cacao
Thecc1EG015379 0.5kb downstream 0.5kb downstream 16763 true scaffold_3: 27636559-27653321 Theobroma cacao
Thecc1EG015379 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 27636559-27637058 Theobroma cacao
Thecc1EG015379 1.0kb upstream 1.0kb upstream 17263 true scaffold_3: 27637059-27654321 Theobroma cacao
Thecc1EG015379 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 27653322-27654321 Theobroma cacao
Thecc1EG015379 1.0kb downstream 1.0kb downstream 17263 true scaffold_3: 27636059-27653321 Theobroma cacao
Thecc1EG015379 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 27636059-27637058 Theobroma cacao
Thecc1EG015379 2.0kb upstream 2.0kb upstream 18263 true scaffold_3: 27637059-27655321 Theobroma cacao
Thecc1EG015379 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 27653322-27655321 Theobroma cacao
Thecc1EG015379 2.0kb downstream 2.0kb downstream 18263 true scaffold_3: 27635059-27653321 Theobroma cacao
Thecc1EG015379 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 27635059-27637058 Theobroma cacao
Thecc1EG015379 5.0kb upstream 5.0kb upstream 21263 true scaffold_3: 27637059-27658321 Theobroma cacao
Thecc1EG015379 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 27653322-27658321 Theobroma cacao
Thecc1EG015379 5.0kb downstream 5.0kb downstream 21263 true scaffold_3: 27632059-27653321 Theobroma cacao
Thecc1EG015379 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 27632059-27637058 Theobroma cacao
Thecc1EG015379 10.0kb upstream 10.0kb upstream 26263 true scaffold_3: 27637059-27663321 Theobroma cacao
Thecc1EG015379 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 27653322-27663321 Theobroma cacao
Thecc1EG015379 10.0kb downstream 10.0kb downstream 26263 true scaffold_3: 27627059-27653321 Theobroma cacao
Thecc1EG015379 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 27627059-27637058 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123832225 5264 Brassicales-Malvales View MSA
124341222 5266 SBM View MSA
124241008 5268 Malvidae View MSA
124067049 5270 Rosid View MSA
123737951 5271 Pentapetalae View MSA
122793648 5272 Eudicot View MSA
122047244 5273 Angiosperm View MSA
121349673 5274 Embryophyte View MSA
123426109 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain