Gene : Thecc1EG015365 T. cacao v1.1
Defline:  (1 of 1) PTHR11817:SF28 - PLASTIDIAL PYRUVATE KINASE 4, CHLOROPLASTIC Genomic Order:  1952
Name:  ? Thecc1EG015365 Secondary Identifier:  ? PAC:27450289
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao ANAEROFRUCAT-PWY Theobroma cacao pathologic  
Tcacao ANAGLYCOLYSIS-PWY Theobroma cacao pathologic  
Tcacao PWY-1042 Theobroma cacao pathologic  
Tcacao PWY-5464 Theobroma cacao pathologic  
Tcacao PWY-5723 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG015365 0.5kb upstream 0.5kb upstream 5416 true scaffold_3: 27585400-27590815 Theobroma cacao
Thecc1EG015365 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 27590316-27590815 Theobroma cacao
Thecc1EG015365 0.5kb downstream 0.5kb downstream 5416 true scaffold_3: 27584900-27590315 Theobroma cacao
Thecc1EG015365 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 27584900-27585399 Theobroma cacao
Thecc1EG015365 1.0kb upstream 1.0kb upstream 5916 true scaffold_3: 27585400-27591315 Theobroma cacao
Thecc1EG015365 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 27590316-27591315 Theobroma cacao
Thecc1EG015365 1.0kb downstream 1.0kb downstream 5916 true scaffold_3: 27584400-27590315 Theobroma cacao
Thecc1EG015365 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 27584400-27585399 Theobroma cacao
Thecc1EG015365 2.0kb upstream 2.0kb upstream 6916 true scaffold_3: 27585400-27592315 Theobroma cacao
Thecc1EG015365 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 27590316-27592315 Theobroma cacao
Thecc1EG015365 2.0kb downstream 2.0kb downstream 6916 true scaffold_3: 27583400-27590315 Theobroma cacao
Thecc1EG015365 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 27583400-27585399 Theobroma cacao
Thecc1EG015365 5.0kb upstream 5.0kb upstream 9916 true scaffold_3: 27585400-27595315 Theobroma cacao
Thecc1EG015365 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 27590316-27595315 Theobroma cacao
Thecc1EG015365 5.0kb downstream 5.0kb downstream 9916 true scaffold_3: 27580400-27590315 Theobroma cacao
Thecc1EG015365 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 27580400-27585399 Theobroma cacao
Thecc1EG015365 10.0kb upstream 10.0kb upstream 14916 true scaffold_3: 27585400-27600315 Theobroma cacao
Thecc1EG015365 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 27590316-27600315 Theobroma cacao
Thecc1EG015365 10.0kb downstream 10.0kb downstream 14916 true scaffold_3: 27575400-27590315 Theobroma cacao
Thecc1EG015365 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 27575400-27585399 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123833815 5264 Brassicales-Malvales View MSA
124344183 5266 SBM View MSA
124244413 5268 Malvidae View MSA
124068114 5270 Rosid View MSA
123738415 5271 Pentapetalae View MSA
122787981 5272 Eudicot View MSA
122044331 5273 Angiosperm View MSA
121346943 5274 Embryophyte View MSA
123380469 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain