Gene : Thecc1EG015615 T. cacao v1.1

Defline:  (1 of 1) PTHR24006//PTHR24006:SF526 - FAMILY NOT NAMED // UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 10-RELATED Genomic Order:  2175
Name:  ? Thecc1EG015615 Secondary Identifier:  ? PAC:27449134

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG015615 0.5kb upstream 0.5kb upstream 8421 true scaffold_3: 28760099-28768519 Theobroma cacao
Thecc1EG015615 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 28768020-28768519 Theobroma cacao
Thecc1EG015615 0.5kb downstream 0.5kb downstream 8421 true scaffold_3: 28759599-28768019 Theobroma cacao
Thecc1EG015615 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 28759599-28760098 Theobroma cacao
Thecc1EG015615 1.0kb upstream 1.0kb upstream 8921 true scaffold_3: 28760099-28769019 Theobroma cacao
Thecc1EG015615 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 28768020-28769019 Theobroma cacao
Thecc1EG015615 1.0kb downstream 1.0kb downstream 8921 true scaffold_3: 28759099-28768019 Theobroma cacao
Thecc1EG015615 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 28759099-28760098 Theobroma cacao
Thecc1EG015615 2.0kb upstream 2.0kb upstream 9921 true scaffold_3: 28760099-28770019 Theobroma cacao
Thecc1EG015615 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 28768020-28770019 Theobroma cacao
Thecc1EG015615 2.0kb downstream 2.0kb downstream 9921 true scaffold_3: 28758099-28768019 Theobroma cacao
Thecc1EG015615 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 28758099-28760098 Theobroma cacao
Thecc1EG015615 5.0kb upstream 5.0kb upstream 12921 true scaffold_3: 28760099-28773019 Theobroma cacao
Thecc1EG015615 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 28768020-28773019 Theobroma cacao
Thecc1EG015615 5.0kb downstream 5.0kb downstream 12921 true scaffold_3: 28755099-28768019 Theobroma cacao
Thecc1EG015615 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 28755099-28760098 Theobroma cacao
Thecc1EG015615 10.0kb upstream 10.0kb upstream 17921 true scaffold_3: 28760099-28778019 Theobroma cacao
Thecc1EG015615 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 28768020-28778019 Theobroma cacao
Thecc1EG015615 10.0kb downstream 10.0kb downstream 17921 true scaffold_3: 28750099-28768019 Theobroma cacao
Thecc1EG015615 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 28750099-28760098 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123837684 5264 Brassicales-Malvales View MSA
124345697 5266 SBM View MSA
124249814 5268 Malvidae View MSA
124063277 5270 Rosid View MSA
123740103 5271 Pentapetalae View MSA
122793775 5272 Eudicot View MSA
122043130 5273 Angiosperm View MSA
121310077 5274 Embryophyte View MSA
123426305 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain