Gene : Thecc1EG015572 T. cacao v1.1
Defline:  (1 of 1) PTHR11695//PTHR11695:SF543 - ALCOHOL DEHYDROGENASE RELATED // SUBFAMILY NOT NAMED Genomic Order:  2137
Name:  ? Thecc1EG015572 Secondary Identifier:  ? PAC:27447990
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-361 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG015572 0.5kb upstream 0.5kb upstream 1762 true scaffold_3: 28589885-28591646 Theobroma cacao
Thecc1EG015572 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 28589885-28590384 Theobroma cacao
Thecc1EG015572 0.5kb downstream 0.5kb downstream 1762 true scaffold_3: 28590385-28592146 Theobroma cacao
Thecc1EG015572 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 28591647-28592146 Theobroma cacao
Thecc1EG015572 1.0kb upstream 1.0kb upstream 2262 true scaffold_3: 28589385-28591646 Theobroma cacao
Thecc1EG015572 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 28589385-28590384 Theobroma cacao
Thecc1EG015572 1.0kb downstream 1.0kb downstream 2262 true scaffold_3: 28590385-28592646 Theobroma cacao
Thecc1EG015572 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 28591647-28592646 Theobroma cacao
Thecc1EG015572 2.0kb upstream 2.0kb upstream 3262 true scaffold_3: 28588385-28591646 Theobroma cacao
Thecc1EG015572 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 28588385-28590384 Theobroma cacao
Thecc1EG015572 2.0kb downstream 2.0kb downstream 3262 true scaffold_3: 28590385-28593646 Theobroma cacao
Thecc1EG015572 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 28591647-28593646 Theobroma cacao
Thecc1EG015572 5.0kb upstream 5.0kb upstream 6262 true scaffold_3: 28585385-28591646 Theobroma cacao
Thecc1EG015572 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 28585385-28590384 Theobroma cacao
Thecc1EG015572 5.0kb downstream 5.0kb downstream 6262 true scaffold_3: 28590385-28596646 Theobroma cacao
Thecc1EG015572 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 28591647-28596646 Theobroma cacao
Thecc1EG015572 10.0kb upstream 10.0kb upstream 11262 true scaffold_3: 28580385-28591646 Theobroma cacao
Thecc1EG015572 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 28580385-28590384 Theobroma cacao
Thecc1EG015572 10.0kb downstream 10.0kb downstream 11262 true scaffold_3: 28590385-28601646 Theobroma cacao
Thecc1EG015572 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 28591647-28601646 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123818163 5264 Brassicales-Malvales Singleton cluster - no MSA
124314485 5266 SBM Singleton cluster - no MSA
124248668 5268 Malvidae View MSA
124074573 5270 Rosid View MSA
123753594 5271 Pentapetalae View MSA
122797386 5272 Eudicot View MSA
122050713 5273 Angiosperm View MSA
121350624 5274 Embryophyte View MSA
123428625 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain