Gene : Thecc1EG015576 T. cacao v1.1
Defline:  (1 of 1) PTHR23198//PTHR23198:SF4 - NUCLEOPORIN // NUCLEOPORIN AUTOPEPTIDASE Genomic Order:  2141
Name:  ? Thecc1EG015576 Secondary Identifier:  ? PAC:27447735
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG015576 0.5kb upstream 0.5kb upstream 11564 true scaffold_3: 28598403-28609966 Theobroma cacao
Thecc1EG015576 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 28609467-28609966 Theobroma cacao
Thecc1EG015576 0.5kb downstream 0.5kb downstream 11564 true scaffold_3: 28597903-28609466 Theobroma cacao
Thecc1EG015576 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 28597903-28598402 Theobroma cacao
Thecc1EG015576 1.0kb upstream 1.0kb upstream 12064 true scaffold_3: 28598403-28610466 Theobroma cacao
Thecc1EG015576 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 28609467-28610466 Theobroma cacao
Thecc1EG015576 1.0kb downstream 1.0kb downstream 12064 true scaffold_3: 28597403-28609466 Theobroma cacao
Thecc1EG015576 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 28597403-28598402 Theobroma cacao
Thecc1EG015576 2.0kb upstream 2.0kb upstream 13064 true scaffold_3: 28598403-28611466 Theobroma cacao
Thecc1EG015576 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 28609467-28611466 Theobroma cacao
Thecc1EG015576 2.0kb downstream 2.0kb downstream 13064 true scaffold_3: 28596403-28609466 Theobroma cacao
Thecc1EG015576 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 28596403-28598402 Theobroma cacao
Thecc1EG015576 5.0kb upstream 5.0kb upstream 16064 true scaffold_3: 28598403-28614466 Theobroma cacao
Thecc1EG015576 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 28609467-28614466 Theobroma cacao
Thecc1EG015576 5.0kb downstream 5.0kb downstream 16064 true scaffold_3: 28593403-28609466 Theobroma cacao
Thecc1EG015576 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 28593403-28598402 Theobroma cacao
Thecc1EG015576 10.0kb upstream 10.0kb upstream 21064 true scaffold_3: 28598403-28619466 Theobroma cacao
Thecc1EG015576 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 28609467-28619466 Theobroma cacao
Thecc1EG015576 10.0kb downstream 10.0kb downstream 21064 true scaffold_3: 28588403-28609466 Theobroma cacao
Thecc1EG015576 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 28588403-28598402 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123831227 5264 Brassicales-Malvales View MSA
124341872 5266 SBM View MSA
124253768 5268 Malvidae View MSA
124061864 5270 Rosid View MSA
123748776 5271 Pentapetalae View MSA
122797875 5272 Eudicot View MSA
122041710 5273 Angiosperm View MSA
121349617 5274 Embryophyte View MSA
123427472 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain