Gene : Thecc1EG015575 T. cacao v1.1
Defline:  (1 of 1) K02940 - large subunit ribosomal protein L9e (RP-L9e, RPL9) Genomic Order:  2140
Name:  ? Thecc1EG015575 Secondary Identifier:  ? PAC:27450974
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG015575 0.5kb upstream 0.5kb upstream 2539 true scaffold_3: 28596269-28598807 Theobroma cacao
Thecc1EG015575 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 28598308-28598807 Theobroma cacao
Thecc1EG015575 0.5kb downstream 0.5kb downstream 2539 true scaffold_3: 28595769-28598307 Theobroma cacao
Thecc1EG015575 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 28595769-28596268 Theobroma cacao
Thecc1EG015575 1.0kb upstream 1.0kb upstream 3039 true scaffold_3: 28596269-28599307 Theobroma cacao
Thecc1EG015575 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 28598308-28599307 Theobroma cacao
Thecc1EG015575 1.0kb downstream 1.0kb downstream 3039 true scaffold_3: 28595269-28598307 Theobroma cacao
Thecc1EG015575 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 28595269-28596268 Theobroma cacao
Thecc1EG015575 2.0kb upstream 2.0kb upstream 4039 true scaffold_3: 28596269-28600307 Theobroma cacao
Thecc1EG015575 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 28598308-28600307 Theobroma cacao
Thecc1EG015575 2.0kb downstream 2.0kb downstream 4039 true scaffold_3: 28594269-28598307 Theobroma cacao
Thecc1EG015575 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 28594269-28596268 Theobroma cacao
Thecc1EG015575 5.0kb upstream 5.0kb upstream 7039 true scaffold_3: 28596269-28603307 Theobroma cacao
Thecc1EG015575 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 28598308-28603307 Theobroma cacao
Thecc1EG015575 5.0kb downstream 5.0kb downstream 7039 true scaffold_3: 28591269-28598307 Theobroma cacao
Thecc1EG015575 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 28591269-28596268 Theobroma cacao
Thecc1EG015575 10.0kb upstream 10.0kb upstream 12039 true scaffold_3: 28596269-28608307 Theobroma cacao
Thecc1EG015575 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 28598308-28608307 Theobroma cacao
Thecc1EG015575 10.0kb downstream 10.0kb downstream 12039 true scaffold_3: 28586269-28598307 Theobroma cacao
Thecc1EG015575 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 28586269-28596268 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123818710 5264 Brassicales-Malvales Singleton cluster - no MSA
124315007 5266 SBM Singleton cluster - no MSA
124163957 5268 Malvidae Singleton cluster - no MSA
124074174 5270 Rosid View MSA
123746970 5271 Pentapetalae View MSA
122791041 5272 Eudicot View MSA
122049178 5273 Angiosperm View MSA
121350412 5274 Embryophyte View MSA
123424125 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain