Gene : Thecc1EG015564 T. cacao v1.1
Defline:  (1 of 1) PTHR21433 - TRANSMEMBRANE PROTEIN INDUCED BY TUMOR NECROSIS FACTOR ALPHA Genomic Order:  2129
Name:  ? Thecc1EG015564 Secondary Identifier:  ? PAC:27450082
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG015564 0.5kb upstream 0.5kb upstream 5511 true scaffold_3: 28540229-28545739 Theobroma cacao
Thecc1EG015564 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 28545240-28545739 Theobroma cacao
Thecc1EG015564 0.5kb downstream 0.5kb downstream 5511 true scaffold_3: 28539729-28545239 Theobroma cacao
Thecc1EG015564 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 28539729-28540228 Theobroma cacao
Thecc1EG015564 1.0kb upstream 1.0kb upstream 6011 true scaffold_3: 28540229-28546239 Theobroma cacao
Thecc1EG015564 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 28545240-28546239 Theobroma cacao
Thecc1EG015564 1.0kb downstream 1.0kb downstream 6011 true scaffold_3: 28539229-28545239 Theobroma cacao
Thecc1EG015564 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 28539229-28540228 Theobroma cacao
Thecc1EG015564 2.0kb upstream 2.0kb upstream 7011 true scaffold_3: 28540229-28547239 Theobroma cacao
Thecc1EG015564 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 28545240-28547239 Theobroma cacao
Thecc1EG015564 2.0kb downstream 2.0kb downstream 7011 true scaffold_3: 28538229-28545239 Theobroma cacao
Thecc1EG015564 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 28538229-28540228 Theobroma cacao
Thecc1EG015564 5.0kb upstream 5.0kb upstream 10011 true scaffold_3: 28540229-28550239 Theobroma cacao
Thecc1EG015564 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 28545240-28550239 Theobroma cacao
Thecc1EG015564 5.0kb downstream 5.0kb downstream 10011 true scaffold_3: 28535229-28545239 Theobroma cacao
Thecc1EG015564 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 28535229-28540228 Theobroma cacao
Thecc1EG015564 10.0kb upstream 10.0kb upstream 15011 true scaffold_3: 28540229-28555239 Theobroma cacao
Thecc1EG015564 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 28545240-28555239 Theobroma cacao
Thecc1EG015564 10.0kb downstream 10.0kb downstream 15011 true scaffold_3: 28530229-28545239 Theobroma cacao
Thecc1EG015564 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 28530229-28540228 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123837614 5264 Brassicales-Malvales View MSA
124337122 5266 SBM View MSA
124251175 5268 Malvidae View MSA
124065114 5270 Rosid View MSA
123747288 5271 Pentapetalae View MSA
122787986 5272 Eudicot View MSA
122046309 5273 Angiosperm View MSA
121351059 5274 Embryophyte View MSA
123427435 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain