Gene : Thecc1EG015520 T. cacao v1.1
Defline:  (1 of 1) PTHR19919//PTHR19919:SF2 - WD REPEAT CONTAINING PROTEIN // PROTEIN TRANSPARENT TESTA GLABRA 1 Genomic Order:  2090
Name:  ? Thecc1EG015520 Secondary Identifier:  ? PAC:27450243
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG015520 0.5kb upstream 0.5kb upstream 3632 true scaffold_3: 28325016-28328647 Theobroma cacao
Thecc1EG015520 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 28328148-28328647 Theobroma cacao
Thecc1EG015520 0.5kb downstream 0.5kb downstream 3632 true scaffold_3: 28324516-28328147 Theobroma cacao
Thecc1EG015520 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 28324516-28325015 Theobroma cacao
Thecc1EG015520 1.0kb upstream 1.0kb upstream 4132 true scaffold_3: 28325016-28329147 Theobroma cacao
Thecc1EG015520 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 28328148-28329147 Theobroma cacao
Thecc1EG015520 1.0kb downstream 1.0kb downstream 4132 true scaffold_3: 28324016-28328147 Theobroma cacao
Thecc1EG015520 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 28324016-28325015 Theobroma cacao
Thecc1EG015520 2.0kb upstream 2.0kb upstream 5132 true scaffold_3: 28325016-28330147 Theobroma cacao
Thecc1EG015520 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 28328148-28330147 Theobroma cacao
Thecc1EG015520 2.0kb downstream 2.0kb downstream 5132 true scaffold_3: 28323016-28328147 Theobroma cacao
Thecc1EG015520 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 28323016-28325015 Theobroma cacao
Thecc1EG015520 5.0kb upstream 5.0kb upstream 8132 true scaffold_3: 28325016-28333147 Theobroma cacao
Thecc1EG015520 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 28328148-28333147 Theobroma cacao
Thecc1EG015520 5.0kb downstream 5.0kb downstream 8132 true scaffold_3: 28320016-28328147 Theobroma cacao
Thecc1EG015520 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 28320016-28325015 Theobroma cacao
Thecc1EG015520 10.0kb upstream 10.0kb upstream 13132 true scaffold_3: 28325016-28338147 Theobroma cacao
Thecc1EG015520 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 28328148-28338147 Theobroma cacao
Thecc1EG015520 10.0kb downstream 10.0kb downstream 13132 true scaffold_3: 28315016-28328147 Theobroma cacao
Thecc1EG015520 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 28315016-28325015 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123829712 5264 Brassicales-Malvales View MSA
124341460 5266 SBM View MSA
124253509 5268 Malvidae View MSA
124066004 5270 Rosid View MSA
123745660 5271 Pentapetalae View MSA
122791660 5272 Eudicot View MSA
122050418 5273 Angiosperm View MSA
121348109 5274 Embryophyte View MSA
123423806 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain