Gene : Thecc1EG015512 T. cacao v1.1
Defline:  (1 of 1) PTHR33231//PTHR33231:SF1 - FAMILY NOT NAMED // 30S RIBOSOMAL PROTEIN-RELATED Genomic Order:  2084
Name:  ? Thecc1EG015512 Secondary Identifier:  ? PAC:27447505
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG015512 0.5kb upstream 0.5kb upstream 2967 true scaffold_3: 28295674-28298640 Theobroma cacao
Thecc1EG015512 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 28298141-28298640 Theobroma cacao
Thecc1EG015512 0.5kb downstream 0.5kb downstream 2967 true scaffold_3: 28295174-28298140 Theobroma cacao
Thecc1EG015512 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 28295174-28295673 Theobroma cacao
Thecc1EG015512 1.0kb upstream 1.0kb upstream 3467 true scaffold_3: 28295674-28299140 Theobroma cacao
Thecc1EG015512 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 28298141-28299140 Theobroma cacao
Thecc1EG015512 1.0kb downstream 1.0kb downstream 3467 true scaffold_3: 28294674-28298140 Theobroma cacao
Thecc1EG015512 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 28294674-28295673 Theobroma cacao
Thecc1EG015512 2.0kb upstream 2.0kb upstream 4467 true scaffold_3: 28295674-28300140 Theobroma cacao
Thecc1EG015512 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 28298141-28300140 Theobroma cacao
Thecc1EG015512 2.0kb downstream 2.0kb downstream 4467 true scaffold_3: 28293674-28298140 Theobroma cacao
Thecc1EG015512 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 28293674-28295673 Theobroma cacao
Thecc1EG015512 5.0kb upstream 5.0kb upstream 7467 true scaffold_3: 28295674-28303140 Theobroma cacao
Thecc1EG015512 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 28298141-28303140 Theobroma cacao
Thecc1EG015512 5.0kb downstream 5.0kb downstream 7467 true scaffold_3: 28290674-28298140 Theobroma cacao
Thecc1EG015512 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 28290674-28295673 Theobroma cacao
Thecc1EG015512 10.0kb upstream 10.0kb upstream 12467 true scaffold_3: 28295674-28308140 Theobroma cacao
Thecc1EG015512 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 28298141-28308140 Theobroma cacao
Thecc1EG015512 10.0kb downstream 10.0kb downstream 12467 true scaffold_3: 28285674-28298140 Theobroma cacao
Thecc1EG015512 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 28285674-28295673 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123832507 5264 Brassicales-Malvales View MSA
124341157 5266 SBM View MSA
124238845 5268 Malvidae View MSA
124068833 5270 Rosid View MSA
123738015 5271 Pentapetalae View MSA
122786116 5272 Eudicot View MSA
122044034 5273 Angiosperm View MSA
121345807 5274 Embryophyte View MSA
123423894 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain