Gene : Thecc1EG015505 T. cacao v1.1
Defline:  (1 of 7) K02942 - large subunit ribosomal protein LP1 (RP-LP1, RPLP1) Genomic Order:  2077
Name:  ? Thecc1EG015505 Secondary Identifier:  ? PAC:27450353
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG015505 0.5kb upstream 0.5kb upstream 1245 true scaffold_3: 28272964-28274208 Theobroma cacao
Thecc1EG015505 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 28272964-28273463 Theobroma cacao
Thecc1EG015505 0.5kb downstream 0.5kb downstream 1245 true scaffold_3: 28273464-28274708 Theobroma cacao
Thecc1EG015505 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 28274209-28274708 Theobroma cacao
Thecc1EG015505 1.0kb upstream 1.0kb upstream 1745 true scaffold_3: 28272464-28274208 Theobroma cacao
Thecc1EG015505 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 28272464-28273463 Theobroma cacao
Thecc1EG015505 1.0kb downstream 1.0kb downstream 1745 true scaffold_3: 28273464-28275208 Theobroma cacao
Thecc1EG015505 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 28274209-28275208 Theobroma cacao
Thecc1EG015505 2.0kb upstream 2.0kb upstream 2745 true scaffold_3: 28271464-28274208 Theobroma cacao
Thecc1EG015505 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 28271464-28273463 Theobroma cacao
Thecc1EG015505 2.0kb downstream 2.0kb downstream 2745 true scaffold_3: 28273464-28276208 Theobroma cacao
Thecc1EG015505 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 28274209-28276208 Theobroma cacao
Thecc1EG015505 5.0kb upstream 5.0kb upstream 5745 true scaffold_3: 28268464-28274208 Theobroma cacao
Thecc1EG015505 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 28268464-28273463 Theobroma cacao
Thecc1EG015505 5.0kb downstream 5.0kb downstream 5745 true scaffold_3: 28273464-28279208 Theobroma cacao
Thecc1EG015505 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 28274209-28279208 Theobroma cacao
Thecc1EG015505 10.0kb upstream 10.0kb upstream 10745 true scaffold_3: 28263464-28274208 Theobroma cacao
Thecc1EG015505 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 28263464-28273463 Theobroma cacao
Thecc1EG015505 10.0kb downstream 10.0kb downstream 10745 true scaffold_3: 28273464-28284208 Theobroma cacao
Thecc1EG015505 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 28274209-28284208 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123840228 5264 Brassicales-Malvales View MSA
124346847 5266 SBM View MSA
124250249 5268 Malvidae View MSA
124074239 5270 Rosid View MSA
123751356 5271 Pentapetalae View MSA
122787708 5272 Eudicot View MSA
122049908 5273 Angiosperm View MSA
121345630 5274 Embryophyte View MSA
123424644 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain