Gene : Thecc1EG015479 T. cacao v1.1
Defline:  (1 of 2) K02927 - large subunit ribosomal protein L40e (RP-L40e, RPL40) Genomic Order:  2053
Name:  ? Thecc1EG015479 Secondary Identifier:  ? PAC:27448659
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG015479 0.5kb upstream 0.5kb upstream 30701 true scaffold_3: 28141597-28172297 Theobroma cacao
Thecc1EG015479 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 28141597-28142096 Theobroma cacao
Thecc1EG015479 0.5kb downstream 0.5kb downstream 30701 true scaffold_3: 28142097-28172797 Theobroma cacao
Thecc1EG015479 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 28172298-28172797 Theobroma cacao
Thecc1EG015479 1.0kb upstream 1.0kb upstream 31201 true scaffold_3: 28141097-28172297 Theobroma cacao
Thecc1EG015479 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 28141097-28142096 Theobroma cacao
Thecc1EG015479 1.0kb downstream 1.0kb downstream 31201 true scaffold_3: 28142097-28173297 Theobroma cacao
Thecc1EG015479 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 28172298-28173297 Theobroma cacao
Thecc1EG015479 2.0kb upstream 2.0kb upstream 32201 true scaffold_3: 28140097-28172297 Theobroma cacao
Thecc1EG015479 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 28140097-28142096 Theobroma cacao
Thecc1EG015479 2.0kb downstream 2.0kb downstream 32201 true scaffold_3: 28142097-28174297 Theobroma cacao
Thecc1EG015479 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 28172298-28174297 Theobroma cacao
Thecc1EG015479 5.0kb upstream 5.0kb upstream 35201 true scaffold_3: 28137097-28172297 Theobroma cacao
Thecc1EG015479 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 28137097-28142096 Theobroma cacao
Thecc1EG015479 5.0kb downstream 5.0kb downstream 35201 true scaffold_3: 28142097-28177297 Theobroma cacao
Thecc1EG015479 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 28172298-28177297 Theobroma cacao
Thecc1EG015479 10.0kb upstream 10.0kb upstream 40201 true scaffold_3: 28132097-28172297 Theobroma cacao
Thecc1EG015479 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 28132097-28142096 Theobroma cacao
Thecc1EG015479 10.0kb downstream 10.0kb downstream 40201 true scaffold_3: 28142097-28182297 Theobroma cacao
Thecc1EG015479 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 28172298-28182297 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123841008 5264 Brassicales-Malvales View MSA
124341254 5266 SBM View MSA
124250872 5268 Malvidae View MSA
124071470 5270 Rosid View MSA
123747920 5271 Pentapetalae View MSA
122794311 5272 Eudicot View MSA
122042303 5273 Angiosperm View MSA
121349234 5274 Embryophyte View MSA
123425972 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain