Gene : Thecc1EG015474 T. cacao v1.1

Defline:  (1 of 1) KOG2948 - Predicted metal-binding protein Genomic Order:  2049
Name:  ? Thecc1EG015474 Secondary Identifier:  ? PAC:27451139

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG015474 0.5kb upstream 0.5kb upstream 3865 true scaffold_3: 28124502-28128366 Theobroma cacao
Thecc1EG015474 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 28127867-28128366 Theobroma cacao
Thecc1EG015474 0.5kb downstream 0.5kb downstream 3865 true scaffold_3: 28124002-28127866 Theobroma cacao
Thecc1EG015474 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 28124002-28124501 Theobroma cacao
Thecc1EG015474 1.0kb upstream 1.0kb upstream 4365 true scaffold_3: 28124502-28128866 Theobroma cacao
Thecc1EG015474 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 28127867-28128866 Theobroma cacao
Thecc1EG015474 1.0kb downstream 1.0kb downstream 4365 true scaffold_3: 28123502-28127866 Theobroma cacao
Thecc1EG015474 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 28123502-28124501 Theobroma cacao
Thecc1EG015474 2.0kb upstream 2.0kb upstream 5365 true scaffold_3: 28124502-28129866 Theobroma cacao
Thecc1EG015474 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 28127867-28129866 Theobroma cacao
Thecc1EG015474 2.0kb downstream 2.0kb downstream 5365 true scaffold_3: 28122502-28127866 Theobroma cacao
Thecc1EG015474 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 28122502-28124501 Theobroma cacao
Thecc1EG015474 5.0kb upstream 5.0kb upstream 8365 true scaffold_3: 28124502-28132866 Theobroma cacao
Thecc1EG015474 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 28127867-28132866 Theobroma cacao
Thecc1EG015474 5.0kb downstream 5.0kb downstream 8365 true scaffold_3: 28119502-28127866 Theobroma cacao
Thecc1EG015474 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 28119502-28124501 Theobroma cacao
Thecc1EG015474 10.0kb upstream 10.0kb upstream 13365 true scaffold_3: 28124502-28137866 Theobroma cacao
Thecc1EG015474 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 28127867-28137866 Theobroma cacao
Thecc1EG015474 10.0kb downstream 10.0kb downstream 13365 true scaffold_3: 28114502-28127866 Theobroma cacao
Thecc1EG015474 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 28114502-28124501 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123829417 5264 Brassicales-Malvales View MSA
124321594 5266 SBM View MSA
124240154 5268 Malvidae View MSA
124060891 5270 Rosid View MSA
123741833 5271 Pentapetalae View MSA
122789735 5272 Eudicot View MSA
122041582 5273 Angiosperm View MSA
121346472 5274 Embryophyte View MSA
123423927 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain