Gene : Thecc1EG015723 T. cacao v1.1
Defline:  Uncharacterized protein (26%U) Genomic Order:  2272
Name:  ? Thecc1EG015723 Secondary Identifier:  ? PAC:27450558
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG015723 0.5kb upstream 0.5kb upstream 7851 true scaffold_3: 29296650-29304500 Theobroma cacao
Thecc1EG015723 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 29304001-29304500 Theobroma cacao
Thecc1EG015723 0.5kb downstream 0.5kb downstream 7851 true scaffold_3: 29296150-29304000 Theobroma cacao
Thecc1EG015723 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 29296150-29296649 Theobroma cacao
Thecc1EG015723 1.0kb upstream 1.0kb upstream 8351 true scaffold_3: 29296650-29305000 Theobroma cacao
Thecc1EG015723 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 29304001-29305000 Theobroma cacao
Thecc1EG015723 1.0kb downstream 1.0kb downstream 8351 true scaffold_3: 29295650-29304000 Theobroma cacao
Thecc1EG015723 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 29295650-29296649 Theobroma cacao
Thecc1EG015723 2.0kb upstream 2.0kb upstream 9351 true scaffold_3: 29296650-29306000 Theobroma cacao
Thecc1EG015723 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 29304001-29306000 Theobroma cacao
Thecc1EG015723 2.0kb downstream 2.0kb downstream 9351 true scaffold_3: 29294650-29304000 Theobroma cacao
Thecc1EG015723 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 29294650-29296649 Theobroma cacao
Thecc1EG015723 5.0kb upstream 5.0kb upstream 12351 true scaffold_3: 29296650-29309000 Theobroma cacao
Thecc1EG015723 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 29304001-29309000 Theobroma cacao
Thecc1EG015723 5.0kb downstream 5.0kb downstream 12351 true scaffold_3: 29291650-29304000 Theobroma cacao
Thecc1EG015723 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 29291650-29296649 Theobroma cacao
Thecc1EG015723 10.0kb upstream 10.0kb upstream 17351 true scaffold_3: 29296650-29314000 Theobroma cacao
Thecc1EG015723 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 29304001-29314000 Theobroma cacao
Thecc1EG015723 10.0kb downstream 10.0kb downstream 17351 true scaffold_3: 29286650-29304000 Theobroma cacao
Thecc1EG015723 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 29286650-29296649 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123825758 5264 Brassicales-Malvales View MSA
124320742 5266 SBM View MSA
124250039 5268 Malvidae View MSA
124073153 5270 Rosid View MSA
123746144 5271 Pentapetalae View MSA
122794175 5272 Eudicot View MSA
122049832 5273 Angiosperm View MSA
121311609 5274 Embryophyte View MSA
123348884 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain