Gene : Thecc1EG015725 T. cacao v1.1
Defline:  (1 of 6) PF02517 - CAAX protease self-immunity (Abi) Genomic Order:  2273
Name:  ? Thecc1EG015725 Secondary Identifier:  ? PAC:27448375
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG015725 0.5kb upstream 0.5kb upstream 4780 true scaffold_3: 29311006-29315785 Theobroma cacao
Thecc1EG015725 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 29311006-29311505 Theobroma cacao
Thecc1EG015725 0.5kb downstream 0.5kb downstream 4780 true scaffold_3: 29311506-29316285 Theobroma cacao
Thecc1EG015725 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 29315786-29316285 Theobroma cacao
Thecc1EG015725 1.0kb upstream 1.0kb upstream 5280 true scaffold_3: 29310506-29315785 Theobroma cacao
Thecc1EG015725 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 29310506-29311505 Theobroma cacao
Thecc1EG015725 1.0kb downstream 1.0kb downstream 5280 true scaffold_3: 29311506-29316785 Theobroma cacao
Thecc1EG015725 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 29315786-29316785 Theobroma cacao
Thecc1EG015725 2.0kb upstream 2.0kb upstream 6280 true scaffold_3: 29309506-29315785 Theobroma cacao
Thecc1EG015725 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 29309506-29311505 Theobroma cacao
Thecc1EG015725 2.0kb downstream 2.0kb downstream 6280 true scaffold_3: 29311506-29317785 Theobroma cacao
Thecc1EG015725 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 29315786-29317785 Theobroma cacao
Thecc1EG015725 5.0kb upstream 5.0kb upstream 9280 true scaffold_3: 29306506-29315785 Theobroma cacao
Thecc1EG015725 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 29306506-29311505 Theobroma cacao
Thecc1EG015725 5.0kb downstream 5.0kb downstream 9280 true scaffold_3: 29311506-29320785 Theobroma cacao
Thecc1EG015725 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 29315786-29320785 Theobroma cacao
Thecc1EG015725 10.0kb upstream 10.0kb upstream 14280 true scaffold_3: 29301506-29315785 Theobroma cacao
Thecc1EG015725 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 29301506-29311505 Theobroma cacao
Thecc1EG015725 10.0kb downstream 10.0kb downstream 14280 true scaffold_3: 29311506-29325785 Theobroma cacao
Thecc1EG015725 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 29315786-29325785 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123831566 5264 Brassicales-Malvales View MSA
124343326 5266 SBM View MSA
124241562 5268 Malvidae View MSA
124067074 5270 Rosid View MSA
123746065 5271 Pentapetalae View MSA
122791545 5272 Eudicot View MSA
122045418 5273 Angiosperm View MSA
121347772 5274 Embryophyte View MSA
123380622 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain