Gene : Thecc1EG015664 T. cacao v1.1

Defline:  (1 of 2) 4.1.2.53 - 2-keto-3-deoxy-L-rhamnonate aldolase / KDR aldolase Genomic Order:  2215
Name:  ? Thecc1EG015664 Secondary Identifier:  ? PAC:27449309

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG015664 0.5kb upstream 0.5kb upstream 2214 true scaffold_3: 29008432-29010645 Theobroma cacao
Thecc1EG015664 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 29008432-29008931 Theobroma cacao
Thecc1EG015664 0.5kb downstream 0.5kb downstream 2214 true scaffold_3: 29008932-29011145 Theobroma cacao
Thecc1EG015664 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 29010646-29011145 Theobroma cacao
Thecc1EG015664 1.0kb upstream 1.0kb upstream 2714 true scaffold_3: 29007932-29010645 Theobroma cacao
Thecc1EG015664 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 29007932-29008931 Theobroma cacao
Thecc1EG015664 1.0kb downstream 1.0kb downstream 2714 true scaffold_3: 29008932-29011645 Theobroma cacao
Thecc1EG015664 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 29010646-29011645 Theobroma cacao
Thecc1EG015664 2.0kb upstream 2.0kb upstream 3714 true scaffold_3: 29006932-29010645 Theobroma cacao
Thecc1EG015664 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 29006932-29008931 Theobroma cacao
Thecc1EG015664 2.0kb downstream 2.0kb downstream 3714 true scaffold_3: 29008932-29012645 Theobroma cacao
Thecc1EG015664 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 29010646-29012645 Theobroma cacao
Thecc1EG015664 5.0kb upstream 5.0kb upstream 6714 true scaffold_3: 29003932-29010645 Theobroma cacao
Thecc1EG015664 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 29003932-29008931 Theobroma cacao
Thecc1EG015664 5.0kb downstream 5.0kb downstream 6714 true scaffold_3: 29008932-29015645 Theobroma cacao
Thecc1EG015664 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 29010646-29015645 Theobroma cacao
Thecc1EG015664 10.0kb upstream 10.0kb upstream 11714 true scaffold_3: 28998932-29010645 Theobroma cacao
Thecc1EG015664 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 28998932-29008931 Theobroma cacao
Thecc1EG015664 10.0kb downstream 10.0kb downstream 11714 true scaffold_3: 29008932-29020645 Theobroma cacao
Thecc1EG015664 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 29010646-29020645 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123837747 5264 Brassicales-Malvales View MSA
124343254 5266 SBM View MSA
124249871 5268 Malvidae View MSA
124061282 5270 Rosid View MSA
123741108 5271 Pentapetalae View MSA
122791173 5272 Eudicot View MSA
122045726 5273 Angiosperm View MSA
121345930 5274 Embryophyte View MSA
123426145 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain