Gene : Thecc1EG015665 T. cacao v1.1

Defline:  (1 of 2) 4.1.2.53 - 2-keto-3-deoxy-L-rhamnonate aldolase / KDR aldolase Genomic Order:  2216
Name:  ? Thecc1EG015665 Secondary Identifier:  ? PAC:27448177

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG015665 0.5kb upstream 0.5kb upstream 1605 true scaffold_3: 29010339-29011943 Theobroma cacao
Thecc1EG015665 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 29010339-29010838 Theobroma cacao
Thecc1EG015665 0.5kb downstream 0.5kb downstream 1605 true scaffold_3: 29010839-29012443 Theobroma cacao
Thecc1EG015665 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 29011944-29012443 Theobroma cacao
Thecc1EG015665 1.0kb upstream 1.0kb upstream 2105 true scaffold_3: 29009839-29011943 Theobroma cacao
Thecc1EG015665 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 29009839-29010838 Theobroma cacao
Thecc1EG015665 1.0kb downstream 1.0kb downstream 2105 true scaffold_3: 29010839-29012943 Theobroma cacao
Thecc1EG015665 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 29011944-29012943 Theobroma cacao
Thecc1EG015665 2.0kb upstream 2.0kb upstream 3105 true scaffold_3: 29008839-29011943 Theobroma cacao
Thecc1EG015665 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 29008839-29010838 Theobroma cacao
Thecc1EG015665 2.0kb downstream 2.0kb downstream 3105 true scaffold_3: 29010839-29013943 Theobroma cacao
Thecc1EG015665 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 29011944-29013943 Theobroma cacao
Thecc1EG015665 5.0kb upstream 5.0kb upstream 6105 true scaffold_3: 29005839-29011943 Theobroma cacao
Thecc1EG015665 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 29005839-29010838 Theobroma cacao
Thecc1EG015665 5.0kb downstream 5.0kb downstream 6105 true scaffold_3: 29010839-29016943 Theobroma cacao
Thecc1EG015665 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 29011944-29016943 Theobroma cacao
Thecc1EG015665 10.0kb upstream 10.0kb upstream 11105 true scaffold_3: 29000839-29011943 Theobroma cacao
Thecc1EG015665 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 29000839-29010838 Theobroma cacao
Thecc1EG015665 10.0kb downstream 10.0kb downstream 11105 true scaffold_3: 29010839-29021943 Theobroma cacao
Thecc1EG015665 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 29011944-29021943 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123837781 5264 Brassicales-Malvales View MSA
124322353 5266 SBM View MSA
124249871 5268 Malvidae View MSA
124061282 5270 Rosid View MSA
123741108 5271 Pentapetalae View MSA
122791173 5272 Eudicot View MSA
122045726 5273 Angiosperm View MSA
121345930 5274 Embryophyte View MSA
123426145 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain