Gene : Thecc1EG015646 T. cacao v1.1
Defline:  (1 of 1) K15151 - mediator of RNA polymerase II transcription subunit 10 (MED10, NUT2) Genomic Order:  2199
Name:  ? Thecc1EG015646 Secondary Identifier:  ? PAC:27448519
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG015646 0.5kb upstream 0.5kb upstream 3025 true scaffold_3: 28913429-28916453 Theobroma cacao
Thecc1EG015646 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 28915954-28916453 Theobroma cacao
Thecc1EG015646 0.5kb downstream 0.5kb downstream 3025 true scaffold_3: 28912929-28915953 Theobroma cacao
Thecc1EG015646 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 28912929-28913428 Theobroma cacao
Thecc1EG015646 1.0kb upstream 1.0kb upstream 3525 true scaffold_3: 28913429-28916953 Theobroma cacao
Thecc1EG015646 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 28915954-28916953 Theobroma cacao
Thecc1EG015646 1.0kb downstream 1.0kb downstream 3525 true scaffold_3: 28912429-28915953 Theobroma cacao
Thecc1EG015646 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 28912429-28913428 Theobroma cacao
Thecc1EG015646 2.0kb upstream 2.0kb upstream 4525 true scaffold_3: 28913429-28917953 Theobroma cacao
Thecc1EG015646 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 28915954-28917953 Theobroma cacao
Thecc1EG015646 2.0kb downstream 2.0kb downstream 4525 true scaffold_3: 28911429-28915953 Theobroma cacao
Thecc1EG015646 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 28911429-28913428 Theobroma cacao
Thecc1EG015646 5.0kb upstream 5.0kb upstream 7525 true scaffold_3: 28913429-28920953 Theobroma cacao
Thecc1EG015646 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 28915954-28920953 Theobroma cacao
Thecc1EG015646 5.0kb downstream 5.0kb downstream 7525 true scaffold_3: 28908429-28915953 Theobroma cacao
Thecc1EG015646 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 28908429-28913428 Theobroma cacao
Thecc1EG015646 10.0kb upstream 10.0kb upstream 12525 true scaffold_3: 28913429-28925953 Theobroma cacao
Thecc1EG015646 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 28915954-28925953 Theobroma cacao
Thecc1EG015646 10.0kb downstream 10.0kb downstream 12525 true scaffold_3: 28903429-28915953 Theobroma cacao
Thecc1EG015646 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 28903429-28913428 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123831021 5264 Brassicales-Malvales View MSA
124343050 5266 SBM View MSA
124242904 5268 Malvidae View MSA
124062321 5270 Rosid View MSA
123743947 5271 Pentapetalae View MSA
122790703 5272 Eudicot View MSA
122043326 5273 Angiosperm View MSA
121345853 5274 Embryophyte View MSA
123425675 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain