Gene : Thecc1EG015844 T. cacao v1.1
Defline:  (1 of 19) KOG4282 - Transcription factor GT-2 and related proteins, contains trihelix DNA-binding/SANT domain Genomic Order:  2376
Name:  ? Thecc1EG015844 Secondary Identifier:  ? PAC:27448442
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG015844 0.5kb upstream 0.5kb upstream 4928 true scaffold_3: 29938067-29942994 Theobroma cacao
Thecc1EG015844 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 29938067-29938566 Theobroma cacao
Thecc1EG015844 0.5kb downstream 0.5kb downstream 4928 true scaffold_3: 29938567-29943494 Theobroma cacao
Thecc1EG015844 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 29942995-29943494 Theobroma cacao
Thecc1EG015844 1.0kb upstream 1.0kb upstream 5428 true scaffold_3: 29937567-29942994 Theobroma cacao
Thecc1EG015844 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 29937567-29938566 Theobroma cacao
Thecc1EG015844 1.0kb downstream 1.0kb downstream 5428 true scaffold_3: 29938567-29943994 Theobroma cacao
Thecc1EG015844 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 29942995-29943994 Theobroma cacao
Thecc1EG015844 2.0kb upstream 2.0kb upstream 6428 true scaffold_3: 29936567-29942994 Theobroma cacao
Thecc1EG015844 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 29936567-29938566 Theobroma cacao
Thecc1EG015844 2.0kb downstream 2.0kb downstream 6428 true scaffold_3: 29938567-29944994 Theobroma cacao
Thecc1EG015844 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 29942995-29944994 Theobroma cacao
Thecc1EG015844 5.0kb upstream 5.0kb upstream 9428 true scaffold_3: 29933567-29942994 Theobroma cacao
Thecc1EG015844 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 29933567-29938566 Theobroma cacao
Thecc1EG015844 5.0kb downstream 5.0kb downstream 9428 true scaffold_3: 29938567-29947994 Theobroma cacao
Thecc1EG015844 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 29942995-29947994 Theobroma cacao
Thecc1EG015844 10.0kb upstream 10.0kb upstream 14428 true scaffold_3: 29928567-29942994 Theobroma cacao
Thecc1EG015844 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 29928567-29938566 Theobroma cacao
Thecc1EG015844 10.0kb downstream 10.0kb downstream 14428 true scaffold_3: 29938567-29952994 Theobroma cacao
Thecc1EG015844 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 29942995-29952994 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123837646 5264 Brassicales-Malvales View MSA
124348684 5266 SBM View MSA
124251830 5268 Malvidae View MSA
124069508 5270 Rosid View MSA
123747324 5271 Pentapetalae View MSA
122790376 5272 Eudicot View MSA
122048588 5273 Angiosperm View MSA
121351505 5274 Embryophyte View MSA
123382195 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain