Gene : Thecc1EG015773 T. cacao v1.1
Defline:  (1 of 1) PTHR10210:SF54 - RIBOSE-PHOSPHATE PYROPHOSPHOKINASE 1, CHLOROPLASTIC-RELATED Genomic Order:  2315
Name:  ? Thecc1EG015773 Secondary Identifier:  ? PAC:27449175
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY0-662 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG015773 0.5kb upstream 0.5kb upstream 4703 true scaffold_3: 29532302-29537004 Theobroma cacao
Thecc1EG015773 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 29532302-29532801 Theobroma cacao
Thecc1EG015773 0.5kb downstream 0.5kb downstream 4703 true scaffold_3: 29532802-29537504 Theobroma cacao
Thecc1EG015773 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 29537005-29537504 Theobroma cacao
Thecc1EG015773 1.0kb upstream 1.0kb upstream 5203 true scaffold_3: 29531802-29537004 Theobroma cacao
Thecc1EG015773 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 29531802-29532801 Theobroma cacao
Thecc1EG015773 1.0kb downstream 1.0kb downstream 5203 true scaffold_3: 29532802-29538004 Theobroma cacao
Thecc1EG015773 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 29537005-29538004 Theobroma cacao
Thecc1EG015773 2.0kb upstream 2.0kb upstream 6203 true scaffold_3: 29530802-29537004 Theobroma cacao
Thecc1EG015773 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 29530802-29532801 Theobroma cacao
Thecc1EG015773 2.0kb downstream 2.0kb downstream 6203 true scaffold_3: 29532802-29539004 Theobroma cacao
Thecc1EG015773 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 29537005-29539004 Theobroma cacao
Thecc1EG015773 5.0kb upstream 5.0kb upstream 9203 true scaffold_3: 29527802-29537004 Theobroma cacao
Thecc1EG015773 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 29527802-29532801 Theobroma cacao
Thecc1EG015773 5.0kb downstream 5.0kb downstream 9203 true scaffold_3: 29532802-29542004 Theobroma cacao
Thecc1EG015773 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 29537005-29542004 Theobroma cacao
Thecc1EG015773 10.0kb upstream 10.0kb upstream 14203 true scaffold_3: 29522802-29537004 Theobroma cacao
Thecc1EG015773 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 29522802-29532801 Theobroma cacao
Thecc1EG015773 10.0kb downstream 10.0kb downstream 14203 true scaffold_3: 29532802-29547004 Theobroma cacao
Thecc1EG015773 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 29537005-29547004 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123839095 5264 Brassicales-Malvales View MSA
124346548 5266 SBM View MSA
124240392 5268 Malvidae View MSA
124060795 5270 Rosid View MSA
123749025 5271 Pentapetalae View MSA
122788028 5272 Eudicot View MSA
122042217 5273 Angiosperm View MSA
121347994 5274 Embryophyte View MSA
123427852 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain