Gene : Thecc1EG015961 T. cacao v1.1
Defline:  (1 of 2) PTHR13402 - RGPR-RELATED Genomic Order:  2478
Name:  ? Thecc1EG015961 Secondary Identifier:  ? PAC:27449941
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG015961 0.5kb upstream 0.5kb upstream 8685 true scaffold_3: 30577034-30585718 Theobroma cacao
Thecc1EG015961 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 30577034-30577533 Theobroma cacao
Thecc1EG015961 0.5kb downstream 0.5kb downstream 8685 true scaffold_3: 30577534-30586218 Theobroma cacao
Thecc1EG015961 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 30585719-30586218 Theobroma cacao
Thecc1EG015961 1.0kb upstream 1.0kb upstream 9185 true scaffold_3: 30576534-30585718 Theobroma cacao
Thecc1EG015961 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 30576534-30577533 Theobroma cacao
Thecc1EG015961 1.0kb downstream 1.0kb downstream 9185 true scaffold_3: 30577534-30586718 Theobroma cacao
Thecc1EG015961 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 30585719-30586718 Theobroma cacao
Thecc1EG015961 2.0kb upstream 2.0kb upstream 10185 true scaffold_3: 30575534-30585718 Theobroma cacao
Thecc1EG015961 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 30575534-30577533 Theobroma cacao
Thecc1EG015961 2.0kb downstream 2.0kb downstream 10185 true scaffold_3: 30577534-30587718 Theobroma cacao
Thecc1EG015961 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 30585719-30587718 Theobroma cacao
Thecc1EG015961 5.0kb upstream 5.0kb upstream 13185 true scaffold_3: 30572534-30585718 Theobroma cacao
Thecc1EG015961 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 30572534-30577533 Theobroma cacao
Thecc1EG015961 5.0kb downstream 5.0kb downstream 13185 true scaffold_3: 30577534-30590718 Theobroma cacao
Thecc1EG015961 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 30585719-30590718 Theobroma cacao
Thecc1EG015961 10.0kb upstream 10.0kb upstream 18185 true scaffold_3: 30567534-30585718 Theobroma cacao
Thecc1EG015961 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 30567534-30577533 Theobroma cacao
Thecc1EG015961 10.0kb downstream 10.0kb downstream 18185 true scaffold_3: 30577534-30595718 Theobroma cacao
Thecc1EG015961 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 30585719-30595718 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123829869 5264 Brassicales-Malvales View MSA
124339494 5266 SBM View MSA
124254140 5268 Malvidae View MSA
124072884 5270 Rosid View MSA
123746128 5271 Pentapetalae View MSA
122793039 5272 Eudicot View MSA
122051498 5273 Angiosperm View MSA
121349781 5274 Embryophyte View MSA
123425826 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain