Gene : Thecc1EG015937 T. cacao v1.1
Defline:  Pentatricopeptide repeat-containing Genomic Order:  2458
Name:  ? Thecc1EG015937 Secondary Identifier:  ? PAC:27448623
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG015937 0.5kb upstream 0.5kb upstream 2394 true scaffold_3: 30445349-30447742 Theobroma cacao
Thecc1EG015937 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 30445349-30445848 Theobroma cacao
Thecc1EG015937 0.5kb downstream 0.5kb downstream 2394 true scaffold_3: 30445849-30448242 Theobroma cacao
Thecc1EG015937 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 30447743-30448242 Theobroma cacao
Thecc1EG015937 1.0kb upstream 1.0kb upstream 2894 true scaffold_3: 30444849-30447742 Theobroma cacao
Thecc1EG015937 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 30444849-30445848 Theobroma cacao
Thecc1EG015937 1.0kb downstream 1.0kb downstream 2894 true scaffold_3: 30445849-30448742 Theobroma cacao
Thecc1EG015937 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 30447743-30448742 Theobroma cacao
Thecc1EG015937 2.0kb upstream 2.0kb upstream 3894 true scaffold_3: 30443849-30447742 Theobroma cacao
Thecc1EG015937 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 30443849-30445848 Theobroma cacao
Thecc1EG015937 2.0kb downstream 2.0kb downstream 3894 true scaffold_3: 30445849-30449742 Theobroma cacao
Thecc1EG015937 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 30447743-30449742 Theobroma cacao
Thecc1EG015937 5.0kb upstream 5.0kb upstream 6894 true scaffold_3: 30440849-30447742 Theobroma cacao
Thecc1EG015937 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 30440849-30445848 Theobroma cacao
Thecc1EG015937 5.0kb downstream 5.0kb downstream 6894 true scaffold_3: 30445849-30452742 Theobroma cacao
Thecc1EG015937 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 30447743-30452742 Theobroma cacao
Thecc1EG015937 10.0kb upstream 10.0kb upstream 11894 true scaffold_3: 30435849-30447742 Theobroma cacao
Thecc1EG015937 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 30435849-30445848 Theobroma cacao
Thecc1EG015937 10.0kb downstream 10.0kb downstream 11894 true scaffold_3: 30445849-30457742 Theobroma cacao
Thecc1EG015937 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 30447743-30457742 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122028077 5273 Angiosperm View MSA
123825344 5264 Brassicales-Malvales View MSA
124348453 5266 SBM View MSA
124247690 5268 Malvidae View MSA
124037658 5270 Rosid View MSA
123747543 5271 Pentapetalae View MSA
122772198 5272 Eudicot View MSA
121297622 5274 Embryophyte View MSA
123335659 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain