Gene : Thecc1EG015933 T. cacao v1.1

Defline:  (1 of 1) PTHR10641//PTHR10641:SF558 - MYB-LIKE DNA-BINDING PROTEIN MYB // SUBFAMILY NOT NAMED Genomic Order:  2454
Name:  ? Thecc1EG015933 Secondary Identifier:  ? PAC:27450684

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG015933 0.5kb upstream 0.5kb upstream 2067 true scaffold_3: 30423381-30425447 Theobroma cacao
Thecc1EG015933 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 30423381-30423880 Theobroma cacao
Thecc1EG015933 0.5kb downstream 0.5kb downstream 2067 true scaffold_3: 30423881-30425947 Theobroma cacao
Thecc1EG015933 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 30425448-30425947 Theobroma cacao
Thecc1EG015933 1.0kb upstream 1.0kb upstream 2567 true scaffold_3: 30422881-30425447 Theobroma cacao
Thecc1EG015933 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 30422881-30423880 Theobroma cacao
Thecc1EG015933 1.0kb downstream 1.0kb downstream 2567 true scaffold_3: 30423881-30426447 Theobroma cacao
Thecc1EG015933 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 30425448-30426447 Theobroma cacao
Thecc1EG015933 2.0kb upstream 2.0kb upstream 3567 true scaffold_3: 30421881-30425447 Theobroma cacao
Thecc1EG015933 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 30421881-30423880 Theobroma cacao
Thecc1EG015933 2.0kb downstream 2.0kb downstream 3567 true scaffold_3: 30423881-30427447 Theobroma cacao
Thecc1EG015933 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 30425448-30427447 Theobroma cacao
Thecc1EG015933 5.0kb upstream 5.0kb upstream 6567 true scaffold_3: 30418881-30425447 Theobroma cacao
Thecc1EG015933 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 30418881-30423880 Theobroma cacao
Thecc1EG015933 5.0kb downstream 5.0kb downstream 6567 true scaffold_3: 30423881-30430447 Theobroma cacao
Thecc1EG015933 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 30425448-30430447 Theobroma cacao
Thecc1EG015933 10.0kb upstream 10.0kb upstream 11567 true scaffold_3: 30413881-30425447 Theobroma cacao
Thecc1EG015933 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 30413881-30423880 Theobroma cacao
Thecc1EG015933 10.0kb downstream 10.0kb downstream 11567 true scaffold_3: 30423881-30435447 Theobroma cacao
Thecc1EG015933 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 30425448-30435447 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123825149 5264 Brassicales-Malvales View MSA
124349769 5266 SBM View MSA
124252951 5268 Malvidae View MSA
124072001 5270 Rosid View MSA
123753736 5271 Pentapetalae View MSA
122796974 5272 Eudicot View MSA
122049924 5273 Angiosperm View MSA
123429079 5275 Viridiplantae View MSA
121351179 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain