Gene : Thecc1EG015917 T. cacao v1.1
Defline:  (1 of 191) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Genomic Order:  2440
Name:  ? Thecc1EG015917 Secondary Identifier:  ? PAC:27449823
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG015917 0.5kb upstream 0.5kb upstream 3728 true scaffold_3: 30307843-30311570 Theobroma cacao
Thecc1EG015917 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 30311071-30311570 Theobroma cacao
Thecc1EG015917 0.5kb downstream 0.5kb downstream 3728 true scaffold_3: 30307343-30311070 Theobroma cacao
Thecc1EG015917 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 30307343-30307842 Theobroma cacao
Thecc1EG015917 1.0kb upstream 1.0kb upstream 4228 true scaffold_3: 30307843-30312070 Theobroma cacao
Thecc1EG015917 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 30311071-30312070 Theobroma cacao
Thecc1EG015917 1.0kb downstream 1.0kb downstream 4228 true scaffold_3: 30306843-30311070 Theobroma cacao
Thecc1EG015917 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 30306843-30307842 Theobroma cacao
Thecc1EG015917 2.0kb upstream 2.0kb upstream 5228 true scaffold_3: 30307843-30313070 Theobroma cacao
Thecc1EG015917 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 30311071-30313070 Theobroma cacao
Thecc1EG015917 2.0kb downstream 2.0kb downstream 5228 true scaffold_3: 30305843-30311070 Theobroma cacao
Thecc1EG015917 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 30305843-30307842 Theobroma cacao
Thecc1EG015917 5.0kb upstream 5.0kb upstream 8228 true scaffold_3: 30307843-30316070 Theobroma cacao
Thecc1EG015917 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 30311071-30316070 Theobroma cacao
Thecc1EG015917 5.0kb downstream 5.0kb downstream 8228 true scaffold_3: 30302843-30311070 Theobroma cacao
Thecc1EG015917 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 30302843-30307842 Theobroma cacao
Thecc1EG015917 10.0kb upstream 10.0kb upstream 13228 true scaffold_3: 30307843-30321070 Theobroma cacao
Thecc1EG015917 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 30311071-30321070 Theobroma cacao
Thecc1EG015917 10.0kb downstream 10.0kb downstream 13228 true scaffold_3: 30297843-30311070 Theobroma cacao
Thecc1EG015917 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 30297843-30307842 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123828418 5264 Brassicales-Malvales View MSA
124345296 5266 SBM View MSA
124243295 5268 Malvidae View MSA
124066946 5270 Rosid View MSA
123748514 5271 Pentapetalae View MSA
122797794 5272 Eudicot View MSA
122051419 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351195 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain